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Name : nifJ (STM1651) Accession : NP_460610.1 Strain : Salmonella enterica LT2 Genome accession: NC_003197 Putative virulence/resistance : Virulence Product : pyruvate-flavodoxin oxidoreductase Function : - COG functional category : C : Energy production and conversion COG ID : COG0674 EC number : 1.2.7.1 Position : 1742125 - 1745649 bp Length : 3525 bp Strand : + Note : similar to Escherichia coli oxidoreductase; Fe-S subunit (AAC74460.1) DNA sequence : ATGCAAACAATTGACGGTAATGGCGCAGTAGCGTCGGTGGCGTTCCGTACCAGCGAGGTTATCGCCATTTACCCGATTAC GCCCAGTTCAACAATGGCTGAACAAGCGGATGCCTGGGCCGGCAATGGGCTTAAAAATGTCTGGGGCGATACGCCGCGTG TGGTAGAGATGCAGTCGGAAGGCGGCGCGATCGCCGCCGTTCACGGTGCGTTACAAACCGGTTCGCTTTCTACGTCATTT ACATCATCGCAGGGGCTGCTGCTGATGATTCCAACGCTGTATAAACTGGCGGGGCAGCTCACGCCGTTTGTACTGCACGT TGCCGCGCGCACTGTCGCCACACACGCGCTTTCTATTTTTGGCGACCATTCCGATGTGATGGCGGTCCGCCAGACAGGCT GCGCGATGTTATGCGCCGCCAGCGTTCAGGAAGCGCAGGATTTTGCGCTGATCGCACACAGGGCTACGCTGAAAAGCCGC GTTCCGTTTATTCATTTTTTTGATGGCTTCCGTACATCGCATGAAATCAACAAAATTATACCGCTAACGAATGAAACCAT TCTGAACCTGATGCCGCAGGCGGAGATCGACGCTCACCGCGCCCGCGCGCTGAATCCGGAACATCCGGTGATTCGTGGAA CTTCAGCGAATCCGGACACCTACTTCCAGTCTCGCGAAGCGACCAACCCGTGGTACAACGCCGTTTATGATCATGTTGAA GAGGCGATGAAGGCATTTGGCGACGCTACGGGCCGTCAGTACCAGCCATTTGAATATTATGGCCATCCCCAGGCTGAACG CGTCATCATAATGATGGGCTCCGCCCTCGGCACCTGCGAAGAGGTCGTGGACGAGCTACTGATACGCGGAGAAAAGGTCG GCGTTCTGAAAGTCCGTCTGTTCCGCCCCTTCTCCGCCAAACATTTGTTACAGGCATTACCGGAAACCGTTCGCGCTATC GCCGTGCTGGATCGCACCAAAGAGCCTGGCGCCCAGGCCGAGCCGCTTTATCTGGACGTGATGACCGCACTGGCGGAGGC CTTTAATAATGGCGAGCGCGAAACGTTGCCGCGCACCATTGGCGGCCGTTATGGGCTATCATCCAAAGAGTTCGGCCCGG CGTGCGTACTGGCGGTCTTTAATGAACTCAGCCGTGCGAAACCCAAGCCACGGTTTACGGTGGGCATTTATGATGACGTT ACTAACCTCTCGCTGCCATTACCGGAAAATACCCTGCCCGGCAGCGCTAAACTTGAAGCGTTATTTTACGGTCTGGGAAG CGACGGCAGCGTATCCGCCACGAAAAATAATATTAAAATTATCGGTAATTCTACACCGTGGTATGCGCAAGGTTATTTCG TTTATGACTCTAAAAAAGCTGGCGGGCTCACGGTATCGCACCTGCGCGTCAGCGAGAAACCCATTCGTTCCGCTTACTTA ATTGCTCAGGCGGATTTTGTCGGCTGCCACCAATTACAGTTTATCGATAAATATCAGATGGCGGAGCGTCTAAAGCCCGG CGGTATCTTTCTGCTTAATACGCCGTACAGCGCCGACGAGGTCTGGTCGCGTCTGCCGCAAGAAGTTCAGGCGGTGTTGA ATCAGAAAAAGGCGCGTTTTTACGTGGTTAACGCGGCGAAAATCGCCCGCGAATGTGGACTTGGCGCCCGCATCAATACC GTCATGCAAATGGCTTTCTTCCACCTGACGCATATTCTTCCGGGCGATAGCGCCCTGGTTGAGCTGCAGGGCGCGATTGC CAAAAGCTATAGCAGCAAAGGACAGGATCTGGTTGAGCGTAACTGGCAGGCATTGGCTCTGGCGCAGGAATCGCTGGCGG AAGTGCCGTTGCAGGCGGTTAATCCGCATAGCGCGCATCGCCCGCCGGTCGTCTCCGACGCCGCGCCGGATTTCGTGAAA ACCGTTACCGCCGCCATGTTGGCGGGCCTCGGCGACGCACTGCCTGTTTCCGCCCTGCCGCCGGACGGAACATGGCCAAT GGGCACCACCCGCTGGGAAAAACGCAATATCGCCGAAGAGATTCCTGTCTGGAAAGAGGAACTGTGTACACAATGTAATC ACTGCGTCGCTGCCTGCCCTCACTCGGCAATTCGTGCGAAAGTCGTTTCCCCGCAGGCGATGGAGAACGCGCCAGCCAGT CTGCATTCGCTGGACGTGAAGTCCCGCGATATGCGCGGCCAGAAATATGTGCTGCAGGTCGCGCCGGAAGACTGTACTGG CTGTAATTTATGCGTAGAGGTCTGCCCGGCTAAAGATCGGCAAGATCCACAGATTAAGGCGATTAACATGATGTCACGCC TTGAGCATGTGGAAGAAGAGAAAGTGAATTATGACTTCTTCCTCGACTTACCGGAAATCGAACGCAGCAAACTGGAACGA ATTGATATCCGCACATCGCAGCTCATTACGCCGCTGTTTGAATATTCCGGCGCCTGTTCCGGCTGCGGCGAAACGCCGTA TATTAAACTGCTGACTCAGTTATATGGCGACAGAATGTTAATCGCTAACGCCACGGGGTGTTCCTCTATTTACGGCGGTA ACTTACCCTCAACGCCTTATACCACCGATGCCAACGGACGCGGCCCGGCATGGGCGAATTCGTTATTTGAAGATAACGCG GAATTTGGTCTCGGTTTCCGTCTGAGCGTGGATCAGCACCGGGCGCGCGTCATGCGTTTACTGGCGCAATTCGCCGATCG CATCCCGGCGGAATTAAACGATGCGCTGCATGCCGAAGCAACGCCTGACGTTCGGCGTGAGCAGGTCGCCGCATTACGCC AACATCTGAAATCGGTTGCGGGCGCAGAGGAACTGTTAAAGGATGCTGATGCGCTGGTAGAAAAATCAATCTGGCTGATT GGCGGCGATGGTTGGGCATACGACATCGGCTTTGGCGGTTTAGACCATGTGTTAAGCCTGACGGAGAATGTCAATATTCT GGTTCTGGATACGCAGTGTTACTCCAATACTGGCGGCCAGGCGTCGAAGGCGACGCCGCTTGGCGCCGTCACTAAGTTTG GCGAACATGGCAAGCGTAAAGCCCGTAAAGATCTTGGTGTCAGCATGATGATGTATGGTCATGTTTATGTCGCGCAAATC TCGCTGGGCGCGCAGTTAAACCAGACGGTGAAAGCCATCCAGGAGGCCGAAGCCTGGCCAGGACCGTCGCTGATCATTGC CTATAGCCCCTGTGAAGAACATGGCTACGATCTGGCGCTAAGCCATGACCAGATGCGCCAGTTAACGGCGACCGGTTTCT GGCCGTTATACCGCTTTGATCCCCGCCGTGCGGATGAAGGCAAGCCGCCGCTGGCTCTGGACTCTCGGCCACCGTCTGAT GCCCTGGCGGAAACGTTGCTTAATGAACAGCGTTTCCGTCGCCTGAATGCGCAACAGCCTGAAGTAGCTGAACAATTATG GCGAGATGCCGCATTGGATTTGCAAAAACGCTATGACTTTCTTGCCTTGCTGGCAGGAAAAGCGGAAAAACCCGGCGCAG ATTAA Protein sequence : MQTIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGLKNVWGDTPRVVEMQSEGGAIAAVHGALQTGSLSTSF TSSQGLLLMIPTLYKLAGQLTPFVLHVAARTVATHALSIFGDHSDVMAVRQTGCAMLCAASVQEAQDFALIAHRATLKSR VPFIHFFDGFRTSHEINKIIPLTNETILNLMPQAEIDAHRARALNPEHPVIRGTSANPDTYFQSREATNPWYNAVYDHVE EAMKAFGDATGRQYQPFEYYGHPQAERVIIMMGSALGTCEEVVDELLIRGEKVGVLKVRLFRPFSAKHLLQALPETVRAI AVLDRTKEPGAQAEPLYLDVMTALAEAFNNGERETLPRTIGGRYGLSSKEFGPACVLAVFNELSRAKPKPRFTVGIYDDV TNLSLPLPENTLPGSAKLEALFYGLGSDGSVSATKNNIKIIGNSTPWYAQGYFVYDSKKAGGLTVSHLRVSEKPIRSAYL IAQADFVGCHQLQFIDKYQMAERLKPGGIFLLNTPYSADEVWSRLPQEVQAVLNQKKARFYVVNAAKIARECGLGARINT VMQMAFFHLTHILPGDSALVELQGAIAKSYSSKGQDLVERNWQALALAQESLAEVPLQAVNPHSAHRPPVVSDAAPDFVK TVTAAMLAGLGDALPVSALPPDGTWPMGTTRWEKRNIAEEIPVWKEELCTQCNHCVAACPHSAIRAKVVSPQAMENAPAS LHSLDVKSRDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQDPQIKAINMMSRLEHVEEEKVNYDFFLDLPEIERSKLER IDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRMLIANATGCSSIYGGNLPSTPYTTDANGRGPAWANSLFEDNA EFGLGFRLSVDQHRARVMRLLAQFADRIPAELNDALHAEATPDVRREQVAALRQHLKSVAGAEELLKDADALVEKSIWLI GGDGWAYDIGFGGLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRKARKDLGVSMMMYGHVYVAQI SLGAQLNQTVKAIQEAEAWPGPSLIIAYSPCEEHGYDLALSHDQMRQLTATGFWPLYRFDPRRADEGKPPLALDSRPPSD ALAETLLNEQRFRRLNAQQPEVAEQLWRDAALDLQKRYDFLALLAGKAEKPGAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFJ97267.1 | pyruvate ferredoxin | Virulence | Not named | Protein | 0.0 | 47 |
