Gene Information

Name : ssaL (STM1412)
Accession : NP_460377.1
Strain : Salmonella enterica LT2
Genome accession: NC_003197
Putative virulence/resistance : Virulence
Product : type III secretion system apparatus protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1492229 - 1493245 bp
Length : 1017 bp
Strand : +
Note : secretion system apparatus protein SsaL (SW:SSAL_SALTY)

DNA sequence : 
ATGGTGAAGATAAAAGAGGTAGCGATGAATATTAAAATTAATGAGATAAAAATGACGCCCCCTACAGCATTTACCCCTGG
CCAGGTTATAGAGGAACAAGAGGTTATTTCGCCTTCAATGTTAGCTCTCCAGGAGTTACAGGAAACGACGGGGGCAGCGC
TCTATGAGACGATGGAAGAAATAGGAATGGCGCTGAGTGGTAAACTGCGCGAAAATTATAAATTCACTGATGCTGAGAAA
CTGGAGCGCAGACAGCAGGCTTTGCTGCGTTTGATAAAACAAATACAGGAGGATAATGGGGCAACGTTGCGTCCGCTTAC
CGAAGAGAATAGTGATCCTGATTTACAGAATGCGTATCAAATTATCGCTCTTGCAATGGCGCTTACTGCCGGCGGGTTGT
CAAAAAAGAAAAAACGCGATTTGCAATCGCAACTGGATACGCTTACAGCGGAGGAGGGATGGGAACTTGCCGTTTTTAGT
TTACTGGAACTTGGCGAAGTGGATACCGCTACGCTGTCCTCTCTGAAGCGTTTTATGCAACAGGCGATAGACAACGATGA
AATGCCCTTATCGCAGTGGTTCAGACGCGTGGCAGACTGGCCGGATCGCTGTGAACGGGTCCGTATTTTGCTAAGAGCAG
TAGCCTTTGAACTTAGCATATGCATCGAACCCTCGGAGCAAAGTCGTTTGGCCGCAGCATTAGTACGTTTGCGTCGTTTG
CTGTTATTCCTTGGCCTTGAAAAAGAGTGCCAGCGTGAGGAGTGGATTTGCCAGTTGCCGCCTAATACATTACTGCCGCT
ACTACTCGATATTATTTGTGAGCGCTGGCTTTTCAGTGATTGGTTGCTTGATAGACTTACCGCTATAGTTTCTTCATCGA
AGATGTTCAATCGGTTACTCCAACAACTTGATGCGCAGTTTATGCTGATACCCGATAACTGTTTTAACGACGAAGATCAA
CGTGAACAAATTCTCGAAACGCTTCGTGAAGTAAAGATAAATCAGGTTTTATTCTGA

Protein sequence : 
MVKIKEVAMNIKINEIKMTPPTAFTPGQVIEEQEVISPSMLALQELQETTGAALYETMEEIGMALSGKLRENYKFTDAEK
LERRQQALLRLIKQIQEDNGATLRPLTEENSDPDLQNAYQIIALAMALTAGGLSKKKKRDLQSQLDTLTAEEGWELAVFS
LLELGEVDTATLSSLKRFMQQAIDNDEMPLSQWFRRVADWPDRCERVRILLRAVAFELSICIEPSEQSRLAAALVRLRRL
LLFLGLEKECQREEWICQLPPNTLLPLLLDIICERWLFSDWLLDRLTAIVSSSKMFNRLLQQLDAQFMLIPDNCFNDEDQ
REQILETLREVKINQVLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaL NP_460377.1 type III secretion system apparatus protein Virulence SPI-2 Protein 3e-135 100
ssaL CAA70534.1 secretion system apparatus Virulence SPI-2 Protein 2e-135 100
ssaL YP_216420.1 secretion system apparatus protein SsaL Virulence SPI-2 Protein 3e-134 99
ssaL NP_456116.1 putative secretion system protein Virulence SPI-2 Protein 4e-128 98
ssaL NP_805083.1 secretion system protein Virulence SPI-2 Protein 4e-128 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssaL NP_460377.1 type III secretion system apparatus protein VFG0512 Protein 1e-135 100