Gene Information

Name : ssaK (STM1411)
Accession : NP_460376.1
Strain : Salmonella enterica LT2
Genome accession: NC_003197
Putative virulence/resistance : Virulence
Product : type III secretion system apparatus protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1491589 - 1492263 bp
Length : 675 bp
Strand : +
Note : secretion system apparatus protein SsaK (SW:SSAK_SALTY)

DNA sequence : 
ATGAGTTTTACTTCACTTCCTCTGACGGAAATTAACCATAAGCTACCCGCTCGAAATATTATTGAGTCACAGTGGATAAC
ATTACAATTAACTTTATTTGCGCAAGAGCAACAAGCTAAGAGAGTTTCACATGCTATTGTGAGCTCCGCTTACCGTAAGG
CTGAAAAAATCATCCGAGACGCCTATCGTTATCAGCGTGAACAGAAAGTTGAGCAGCAACAAGAACTAGCGTGCTTGCGT
AAAAATACGCTGGAAAAAATGGAAGTGGAATGGCTGGAACAGCATGTAAAACATTTACAAGACGATGAAAATCAATTTCG
TTCATTGGTCGATCACGCAGCGCATCATATTAAAAATAGTATAGAACAGGTTCTGTTGGCCTGGTTCGACCAACAGTCGG
TAGACAGTGTTATGTGCCATCGTCTGGCACGCCAGGCCACGGCTATGGCGGAAGAGGGAGCGCTTTATTTGCGTATTCAT
CCTGAAAAAGAGGCATTGATGCGAGAAACTTTTGGCAAGCGGTTTACGTTGATTATCGAGCCTGGTTTCTCTCCCGATCA
GGCTGAACTTTCCTCAACACGATATGCCGTTGAATTTTCACTTTCTCGTCATTTCAACGCGTTACTGAAATGGTTACGTA
ATGGTGAAGATAAAAGAGGTAGCGATGAATATTAA

Protein sequence : 
MSFTSLPLTEINHKLPARNIIESQWITLQLTLFAQEQQAKRVSHAIVSSAYRKAEKIIRDAYRYQREQKVEQQQELACLR
KNTLEKMEVEWLEQHVKHLQDDENQFRSLVDHAAHHIKNSIEQVLLAWFDQQSVDSVMCHRLARQATAMAEEGALYLRIH
PEKEALMRETFGKRFTLIIEPGFSPDQAELSSTRYAVEFSLSRHFNALLKWLRNGEDKRGSDEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaK NP_460376.1 type III secretion system apparatus protein Virulence SPI-2 Protein 3e-102 100
ssaK CAA70533.1 secretion system apparatus Virulence SPI-2 Protein 2e-101 100
ssaK YP_216419.1 secretion system apparatus protein SsaK Virulence SPI-2 Protein 6e-99 99
STY1709 NP_456117.1 putative pathogenicity island protein Virulence SPI-2 Protein 9e-100 99
t1279 NP_805082.1 pathogenicity island protein Not tested SPI-2 Protein 9e-100 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssaK NP_460376.1 type III secretion system apparatus protein VFG0511 Protein 1e-102 100