Gene Information

Name : ssaI (STM1408)
Accession : NP_460373.1
Strain : Salmonella enterica LT2
Genome accession: NC_003197
Putative virulence/resistance : Virulence
Product : type III secretion system apparatus protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1490032 - 1490280 bp
Length : 249 bp
Strand : +
Note : SsaI (gi|3776129)

DNA sequence :
ATGAGCGTAGTGCCTGTAAGCACTCAATCTTATGTAAAGTCCTCTGCAGAACCGAGCCAGGAGCAAATTAATTTTTTTGA
ACAATTGCTGAAAGATGAAGCATCCACCAGTAACGCCAGTGCTTTATTACCGCAGGTTATGTTGACCAGACAAATGGATT
ATATGCAGTTAACGGTAGGCGTCGATTATCTTGCCAGAATATCAGGCGCAGCATCGCAAGCGCTTAATAAGCTGGATAAC
ATGGCATGA

Protein sequence :
MSVVPVSTQSYVKSSAEPSQEQINFFEQLLKDEASTSNASALLPQVMLTRQMDYMQLTVGVDYLARISGAASQALNKLDN
MA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaI AAX49622.1 SsaI Virulence SPI-2 Protein 6e-32 100
ssaI NP_460373.1 type III secretion system apparatus protein Virulence SPI-2 Protein 9e-32 100
ssaI CAA12195.1 SsaI Virulence SPI-2 Protein 6e-32 100
ssaI YP_216416.1 secretion system apparatus protein SsaI Virulence SPI-2 Protein 8e-31 97
ssaI NP_456120.1 putative pathogenicity island protein Virulence SPI-2 Protein 4e-30 94
ssaI NP_805079.1 pathogenicity island protein Virulence SPI-2 Protein 4e-30 94

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssaI NP_460373.1 type III secretion system apparatus protein VFG0509 Protein 3e-32 100