Gene Information

Name : sscA (STM1399)
Accession : NP_460364.1
Strain : Salmonella enterica LT2
Genome accession: NC_003197
Putative virulence/resistance : Virulence
Product : secretion system chaperone
Function : -
COG functional category : S : Function unknown
COG ID : COG1729
EC number : -
Position : 1484521 - 1484994 bp
Length : 474 bp
Strand : +
Note : secretion chaperone (gi|3377863)

DNA sequence : 
ATGAAAAAAGACCCGACCCTACAACAGGCACATGACACGATGCGGTTTTTCCGGCGTGGCGGCTCGCTGCGTATGTTGTT
GGATGACGATGTTACACAGCCGCTTAATACTCTGTATCGCTATGCCACGCAGCTTATGGAGGTAAAAGAATTCGCCGGCG
CAGCGCGACTTTTTCAATTGCTGACGATATATGATGCCTGGTCATTTGACTACTGGTTTCGGTTAGGGGAATGCTGCCAG
GCTCAAAAACATTGGGGGGAAGCGATATACGCTTATGGACGCGCGGCACAAATTAAGATTGATGCGCCGCAGGCGCCATG
GGCCGCAGCGGAATGCTATCTCGCGTGTGATAACGTCTGTTATGCAATCAAAGCGTTAAAGGCCGTGGTGCGTATTTGCG
GCGAGGTCAGTGAACATCAAATTCTCCGACAGCGTGCAGAAAAGATGTTACAGCAACTTTCTGACAGGAGCTAA

Protein sequence : 
MKKDPTLQQAHDTMRFFRRGGSLRMLLDDDVTQPLNTLYRYATQLMEVKEFAGAARLFQLLTIYDAWSFDYWFRLGECCQ
AQKHWGEAIYAYGRAAQIKIDAPQAPWAAAECYLACDNVCYAIKALKAVVRICGEVSEHQILRQRAEKMLQQLSDRS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sscA CAA12186.1 SscA Virulence SPI-2 Protein 2e-70 100
sscA NP_460364.1 secretion system chaperone Virulence SPI-2 Protein 3e-70 100
sscA AAC28880.1 putative secretion chaperone Virulence SPI-2 Protein 2e-70 100
sscA NP_456129.1 putative Type III secretion system chaperone protein Virulence SPI-2 Protein 7e-69 99
sscA NP_805070.1 type III secretion system chaperone protein Virulence SPI-2 Protein 7e-69 99
SC1420 YP_216407.1 secretion system chaperone protein SscA Virulence SPI-2 Protein 1e-69 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sscA NP_460364.1 secretion system chaperone VFG0500 Protein 9e-71 100