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Name : potB (STM1225) Accession : NP_460195.1 Strain : Salmonella enterica LT2 Genome accession: NC_003197 Putative virulence/resistance : Unknown Product : spermidine/putrescine ABC transporter membrane protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1176 EC number : - Position : 1311183 - 1312046 bp Length : 864 bp Strand : - Note : can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component DNA sequence : ATGAAGAACACAAGTAAATTCCAGAATGTAGTGATTGTCACTATCGTCGGTTGGCTTGTGTTATTTGTTTTTCTGCCCAA CCTGATGATCATTGGCACCAGCTTTCTGACCCGTGACGACGCCAGTTTCGTCAAGATGGTCTTTACGCTGGATAACTACG CGCGCCTGCTCGATCCGCTCTATTTTGAAGTGCTCCTGCACTCTCTGAATATGGCGCTGATCGCCACCCTCTCCTGCCTG GTGCTGGGCTATCCTTTTGCCTGGTTTCTGGCGAAGTTACCGGAAAAGATACGTCCGTTATTGCTGTTTTTGCTGATTGT TCCTTTCTGGACCAACTCACTGATCCGCATCTATGGGCTGAAAATATTCCTGAGCACTAAAGGTTATCTCAATGAATTCC TGCTGTGGCTGGGCGTGATTGATACACCGATTCGCATCATGTTCACCCCGAGCGCCGTTATTATCGGCCTGGTTTACATT TTGCTGCCATTTATGGTCATGCCGCTCTACTCCAGCATTGAGAAGCTCGACAAACCACTACTGGAGGCCGCACGCGATCT CGGCGCCAGTAAAATGCAAACGTTCATCCGCATCATTATTCCATTAACCATGCCGGGCATTGTCGCCGGTTGCCTGCTCG TGATGCTACCGGCAATGGGCCTGTTCTACGTCTCCGATTTAATGGGTGGCGCGAAAAACCTGCTGATTGGTAACGTCATT AAGGTACAGTTCCTGAATATTCGCGATTGGCCGTTTGGCGCGGCTACCAGCATTACGCTGACCATTGTGATGGGACTCAT GCTGTTGATTTACTGGCGGGCTTCCCGCTTATTGAATAAGAAGGTGAGTGATATAAGCGATTAA Protein sequence : MKNTSKFQNVVIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFVKMVFTLDNYARLLDPLYFEVLLHSLNMALIATLSCL VLGYPFAWFLAKLPEKIRPLLLFLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYI LLPFMVMPLYSSIEKLDKPLLEAARDLGASKMQTFIRIIIPLTMPGIVAGCLLVMLPAMGLFYVSDLMGGAKNLLIGNVI KVQFLNIRDWPFGAATSITLTIVMGLMLLIYWRASRLLNKKVSDISD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| potB | BAA36746.1 | - | Not tested | LIM | Protein | 3e-122 | 98 |
