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Name : pipD (STM1094) Accession : NP_460067.1 Strain : Salmonella enterica LT2 Genome accession: NC_003197 Putative virulence/resistance : Virulence Product : pathogenicity island-encoded protein D Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG4690 EC number : - Position : 1180638 - 1182107 bp Length : 1470 bp Strand : - Note : similar to dipeptidase A DNA sequence : ATGAAAAAGTATCTTGCATTCGCCGTTACGCTGCTGGGTATGGGTAAAGTCATCGCCTGTACTACCCTTTTGGTAGGCAA TCAGGCTTCGGCTGACGGCTCCTTCATTATCGCGCGCAACGAAGATGGCTCGGCAAATAACGCCAAGCATAAGGTTATTC ATCCCATCGCGTTTCATCAACAAGGCGAGTATAAAGCACATCGGAACAATTTTAGCTGGCCGCTTCCGGAGACAGCGATG CGCTATACGGCGATTCATGACTTTGATACTAACGATAACGCCATGGGTGAAGCCGGTTTCAATTCGGCGGGCGTCGGAAT GAGCGCAACGGAAACCATTTATAACGGCAGAGCGGCGCTGGCTGCCGATCCTTACGTGACAAAAACGGGAATCACGGAAG ACGCCATTGAGTCCGTGATCCTGCCAGTGGCGCAATCGGCGCGTCAGGGCGCCAAATTACTGGGAGATATTATTGAACAA AAAGGCGCGGGCGAAGGTTTCGGCGTCGCGTTTATTGATAGCAAAGAGATATGGTATCTGGAGACGGGAAGCGGTCATCA ATGGCTGGCAGTACGACTTCCGGCAGATAGCTATTTCGTTTCCGCCAATCAGGGACGTTTACGCCATTACGATCCGAATG ATAACGCGAATTATATGGCGTCACCAACGTTAGTAAGCTTTGCGAAAAAGCAGGGATTATATGATCCGGCCCGCGGCGAA TTCGACTTTCATCAAGCCTATTCGCAGGATAACAAAAACGATACCACCTATAATTATCCGCGCGTCTGGACGCTACAACA CCAGTTTAATCCGCATCTGGATACGGTCGTTAGCGAAGGGGAAACATTTCCTGTTTTTTTAACGCCAATAACGAAGATCA GCGTGGCGGCAGTAAAAAACGCGCTACGCAATCACTATCAGGGAACGTCGCACGACCCTTATGCCAGTCATAATCCACAA GAACCATGGCGACCTATATCCGTTTTTCGTACCCAGGAGTCACATATTTTACAGGTCAGACCGAAATTACCGCAGGCTAT CGGCAACGTAGAATACATCGCCTATGGAATGCCATCTCTTAGCGTCTATCTCCCCTATTATCAGGGGATGCGTCATTATC AACCCGGAGATGATAAAGGAACCGATCGGGCGAGCAACGACTCTACCTACTGGACATTCCGCACGCTGCAAACGCTGGTT ATGCAGGACTACAATGCGTTTGCGCCAGATGTGCAACACGCCTGGAAAACATTTGAACAGCAAACAGCTAAGCAGCAGTA TAAGATGGAGCAGAGCTATCTGAGATTATATGCGTCGCATCCGAAAGAAGCGCAACGCTTACTGCAAAATTTTGAAGATA AAACGATGCAAAATGCGCAGACGCTCGCCCGTCGCCTGACCAATAATATTATTACGACAATGACTTACCGTACAGATATG AAATATCACTTTTCAAGTACGCAGCCATAA Protein sequence : MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPIAFHQQGEYKAHRNNFSWPLPETAM RYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAALAADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQ KGAGEGFGVAFIDSKEIWYLETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFPVFLTPITKISVAAVKNALRNHYQGTSHDPYASHNPQ EPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYYQGMRHYQPGDDKGTDRASNDSTYWTFRTLQTLV MQDYNAFAPDVQHAWKTFEQQTAKQQYKMEQSYLRLYASHPKEAQRLLQNFEDKTMQNAQTLARRLTNNIITTMTYRTDM KYHFSSTQP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pipD | NP_460067.1 | pathogenicity island-encoded protein D | Virulence | SPI-5 | Protein | 0.0 | 100 |
| pipD | NP_455591.1 | putative secreted peptidase | Virulence | SPI-5 | Protein | 0.0 | 99 |
| pipD | AAC33721.1 | dipeptidase homolog | Virulence | SPI-5 | Protein | 3e-178 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pipD | NP_460067.1 | pathogenicity island-encoded protein D | VFG0594 | Protein | 0.0 | 100 |
