Gene Information

Name : thcA (SAV_7177)
Accession : NP_828353.1
Strain : Streptomyces avermitilis MA-4680
Genome accession: NC_003155
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 8543834 - 8545357 bp
Length : 1524 bp
Strand : -
Note : PF00171: Aldehyde dehydrogenase family

DNA sequence :
ATGACCCGTTTCGCAGCGCCCGGCACCGACGGCGCGATCGTCTCCTACCAGGCGCGCTATGACCACTTCATCGGCGGCGA
GTACGTGCCGCCGGCCCGCGGACAGTACTTCGAGAACCCGAGCCCGGTGAACGGGCAGCCGTTCACGGAGATCGCGCGGG
GCACGGCCGAGGACGTGGAGCGCGCGCTCGACGCCGCGCACGCGGTCGCCCCCGCCTGGGGCCGCACGTCCGTGGCGGAG
CGCTCCGACATCCTCCGCCGCATCGCCGACCGGATGGAGGCGAACCTGGAGAAGCTGGCGGTCGCGGAGAGCTGGGAGAA
CGGCAAACCGGTCCGTGAGACGCTGGCCGCGGACATTCCGCTGGCCATCGACCACTTCCGCTACTTCGCGGGCGCGATCC
GCGCGCAGGAGGGTTCCCTCGGCGAGGTCGACGACGACACGGTCGCGTACCACTTCCACGAGCCGCTCGGCGTGGTCGCG
CAGATCATCCCGTGGAACTTCCCGATCCTGATGGCGACGTGGAAGCTCGCCCCGGCCCTCGCGGCGGGCAACGCGGTCGT
CCTCAAGCCCGCCGAACAGACCCCGGCGTCCATCCACTACTGGCTGAGCCTGGTGGCCGACCTGCTGCCGCCGGGCGTGC
TGAACATCGTCAACGGGTTCGGGGTGGAGGCGGGCAAACCGCTCGCGTCCAGCCCGCGGGTGGCGAAGGTGGCGTTCACC
GGCGAGACCACGACGGGGCGGCTGATCATGCAGTACGCCTCCGAGAACATCACCCCGGTCACGCTCGAACTCGGCGGCAA
GTCCCCGAACATCTTCTTCGACGACGTCTGGTCGGCGAACGACGACTTCCGTGACAAGGCGCTCGAAGGCTTCACGATGT
TCGCCCTCAACCAGGGCGAGGTGTGCACCTGCCCGTCCCGGGCGCTCGTCCAGCGCGGCCAGTACGCCGAGTTCATGGAG
GCGGCGGTCGCCCGCACCGAGCTGATCAAGACCGGTCACCCGCTCGACACGGACACGATGATCGGCGCCCAGGCGTCCAA
CGACCAGCTGGAGAAGATCCTCTCCTATCTGGACATCGGCCGGCAGGAGGGCGCGAAGATCCTCACCGGCGGCGAACGCA
TCGAGCACGACGGTGAGTTGAAGGGCGGTTACTACGTCCAGCCGACCATCTTCGAGGGCGACAACCGTATGCGGATCTTC
CAGGAGGAGATCTTCGGTCCGGTCGTCTCGGTGACGTCGTTCAATGACTTCGACGACGCCATCAAGATCGCCAACGACAC
GCTGTACGGGCTCGGCGCGGGCGTATGGACGCGGGACATCAACACCGCGTACCGCGCGGGCCGTGCCATCCAGGCGGGCC
GCGTCTGGACGAACTGCTACCACGCCTACCCGGCCCACGCGGCGTTCGGCGGCTACAAGGGCTCGGGCATCGGCCGCGAG
ACCCACAAGATGATGCTGGACCACTACCAGCAGACGAAGAACCTACTGGTGTCGTACTCGCCGAAGAAGCTGGGCTTCTT
CTAG

Protein sequence :
MTRFAAPGTDGAIVSYQARYDHFIGGEYVPPARGQYFENPSPVNGQPFTEIARGTAEDVERALDAAHAVAPAWGRTSVAE
RSDILRRIADRMEANLEKLAVAESWENGKPVRETLAADIPLAIDHFRYFAGAIRAQEGSLGEVDDDTVAYHFHEPLGVVA
QIIPWNFPILMATWKLAPALAAGNAVVLKPAEQTPASIHYWLSLVADLLPPGVLNIVNGFGVEAGKPLASSPRVAKVAFT
GETTTGRLIMQYASENITPVTLELGGKSPNIFFDDVWSANDDFRDKALEGFTMFALNQGEVCTCPSRALVQRGQYAEFME
AAVARTELIKTGHPLDTDTMIGAQASNDQLEKILSYLDIGRQEGAKILTGGERIEHDGELKGGYYVQPTIFEGDNRMRIF
QEEIFGPVVSVTSFNDFDDAIKIANDTLYGLGAGVWTRDINTAYRAGRAIQAGRVWTNCYHAYPAHAAFGGYKGSGIGRE
THKMMLDHYQQTKNLLVSYSPKKLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-149 61
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-154 59
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-154 59
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-154 59
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-153 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
thcA NP_828353.1 aldehyde dehydrogenase VFG0082 Protein 3e-149 61