Gene Information

Name : SAV_6454 (SAV_6454)
Accession : NP_827630.1
Strain : Streptomyces avermitilis MA-4680
Genome accession: NC_003155
Putative virulence/resistance : Resistance
Product : sodium:solute symporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 7732028 - 7733677 bp
Length : 1650 bp
Strand : +
Note : PF00474: Sodium:solute symporter family

DNA sequence :
ATGAGCCCCGCGATCACCCTGGCCGCCGACGCGGCCGGCCCACGTCTTCTCGCCGCCGGTGAGGCGAGCGAGCACCGGCC
GCTGATCATCACCCTGTTCGCGGTGTTCGTCGCCGCGACCCTCGTCATCACCGTCTGGGCGGGCCGGCAGACCAAGGACG
CCGCCGACTTCTACGCGGGCGGCCGCCAGTTCACCGCCTTCCAGAACGGCCTCGCGGTCTCCGGTGACTACATGTCCGCC
GCGTCCTTCCTCGGCATCGCGGGCGCCATCGCCCTCTTCGGGTACGACGGCTTCCTGTACTCCATCGGATTCCTCGTCGC
CTGGCTGGTCGCCCTGCTCCTGGTCGCCGAGCCGCTGCGCAACTCCGGCCGCTACACCATGGGCGACGTCCTCGCGTTCC
GCATGCGCCAGCGCCCCGTCCGCACGGCCGCCGGCACCTCCACGATCGTCGTCTCGATCTTCTACCTGCTGGCCCAGATG
GCGGGCGCGGGCGTCCTCGTCTCGCTGCTGCTCGGTATCACCAGCGACGGCGGCAAGATCGGCATCGTCGCCCTGGTCGG
CGTGCTGATGATCGTGTACGTCACCATCGGCGGCATGAAGGGCACCACCTGGGTCCAGATGGTCAAGGCCGTGCTGCTGA
TCGCCGGCGCCCTGCTGCTCACCTTCCTGGTGCTGCTGAAGTTCAACTTCAACATCTCCGACCTGCTCGGCAAGGCCGCC
TCCAACAGCGGCAAGGGCAGCGCCTTCCTCGAGCCCGGCCTCAAGTACGGCGCCACCTCGACGACCAAGCTGGACTTCAT
CTCCCTGGGCATCGCCCTGGTCCTGGGCACCGCGGGCCTGCCGCACATCCTGATCCGCTTCTACACGGTGCCCACCGCCA
AGGCCGCGCGGAAGTCAGTGAACTGGGCTATCGGCCTCATCGGCGGCTTCTACCTGATGACCCTCGCGCTCGGCTTCGGC
GCGGCCGCGCTCATCAAGCCGGACGAGATCATCGCCTCCAACAAGGCGGGCAACACGGCCGCACCCCTGCTCGCCCTGCA
CCTGGGAGGCGTCGACTCCAACTGGGGTGCCATCCTGCTCGCCACCATCTCGGCGGTCGCCTTCGCCACGATCCTCGCGG
TCGTCGCGGGCCTGACCCTGGCCTCCTCCTCGTCGTTCGCGCACGACATCTACGCGAACGTCATCAAGAAGGGGCAGGCC
AGCGAGAAGGACGAGGTACGGGCCGCCCGGTACGCGACGATCGCCATCGGCGTCGTGTCCATCGGCCTCGGCGCCCTCGC
CCGCGACTTGAACGTCGCAGGCCTCGTCGCCCTCGCCTTCGCCGTCGCCGCCTCCGCCAACCTGCCGACGATCCTCTACA
GCCTCTTCTGGAAGCGGTTCACCACCCCGGGAGCGCTCTGGTCGATCTACGGCGGCCTGATCACGGCGGTCGGCCTGGTG
CTGTTCTCGCCGGTGGTCTCGGGCAAGCCCACGTCGATGTTCCCGGGCGTCGACTTCCACTGGTTCCCGCTGGAGAACCC
CGGCATCGTCTCCATCCCGGTCGGCTTCCTGCTGGGCTGGCTCGGCACGATCCTGTCGAAGGAGGAGCCGGACACCGCCA
AGTACGCGGAGCTGGAGGTGCGGTCCCTGTCGGGCACCGGAGCGCACTGA

Protein sequence :
MSPAITLAADAAGPRLLAAGEASEHRPLIITLFAVFVAATLVITVWAGRQTKDAADFYAGGRQFTAFQNGLAVSGDYMSA
ASFLGIAGAIALFGYDGFLYSIGFLVAWLVALLLVAEPLRNSGRYTMGDVLAFRMRQRPVRTAAGTSTIVVSIFYLLAQM
AGAGVLVSLLLGITSDGGKIGIVALVGVLMIVYVTIGGMKGTTWVQMVKAVLLIAGALLLTFLVLLKFNFNISDLLGKAA
SNSGKGSAFLEPGLKYGATSTTKLDFISLGIALVLGTAGLPHILIRFYTVPTAKAARKSVNWAIGLIGGFYLMTLALGFG
AAALIKPDEIIASNKAGNTAAPLLALHLGGVDSNWGAILLATISAVAFATILAVVAGLTLASSSSFAHDIYANVIKKGQA
SEKDEVRAARYATIAIGVVSIGLGALARDLNVAGLVALAFAVAASANLPTILYSLFWKRFTTPGALWSIYGGLITAVGLV
LFSPVVSGKPTSMFPGVDFHWFPLENPGIVSIPVGFLLGWLGTILSKEEPDTAKYAELEVRSLSGTGAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 1e-111 59
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 3e-63 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SAV_6454 NP_827630.1 sodium:solute symporter BAC0570 Protein 3e-66 49
SAV_6454 NP_827630.1 sodium:solute symporter BAC0564 Protein 2e-67 45