Gene Information

Name : SAV_6304 (SAV_6304)
Accession : NP_827480.1
Strain : Streptomyces avermitilis MA-4680
Genome accession: NC_003155
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 7569642 - 7570388 bp
Length : 747 bp
Strand : -
Note : -

DNA sequence :
GTGAGCCACACCGCTCCTTTGGTGCGCGCCGAGGGTCTGGTCAAGACCCACTTCGGCGAGGGTGCGCCCGCGTACGCCGT
GCGCGGGGTGGACCTCGCCGTGCGGCAGGGCGAGTTCGTGGCCGTCACCGGCCCGTCCGGTGCCGGGAAGTCGACCTTGC
TGCATCTGCTCGGCGGGCTCCAGCGGCCGGACAGCGGCTCCCTCTGGCTGGACGGCGAGTGCACCGACGCGTACGGCGAG
GCCCGCTGGGCGGTGGAGCGCAGGCGCCGTATCGGCATCGTCTTCCAGTTCTTCAACCTGGTGTCGAACCTGTCGGTCGC
CGACAACGTCGAGCTGCCGGCCCTGCTCGCCGGGGTCTCTCCCAAGCGGGCGCGCGCCGAGCGCGAGCAGCTCCTCGCCG
AGCTGGGCCTCGAGGGCAAGGAGCGCAGCATGCCGGGCGAGCTGTCCGGTGGCGAGCAGCAGCGGGTGGCGCTGGCCCGG
GCCCTGGTCAACCACCCGCCCCTGCTGCTGGCCGACGAGCCGGCGGGCAGCCTCGACAGCAAGGGCACGCGCGAGGTCAT
GCGGCTGCTGACCCGCTTCCACCAGCGCGGCCAGACCATCGTGCTCGTCACCCATGACGCCCGGCTCGCGAGCGCCGCGG
ACCGGGTGATCAGCTTCTTCGACGGGCGCATCGCCGACGACGCGGAACTCGACGGCACCCCGTCGCGCGGCGCCGGGATA
TCCGGCGTGCTGGAACTGAGGGACTGA

Protein sequence :
MSHTAPLVRAEGLVKTHFGEGAPAYAVRGVDLAVRQGEFVAVTGPSGAGKSTLLHLLGGLQRPDSGSLWLDGECTDAYGE
ARWAVERRRRIGIVFQFFNLVSNLSVADNVELPALLAGVSPKRARAEREQLLAELGLEGKERSMPGELSGGEQQRVALAR
ALVNHPPLLLADEPAGSLDSKGTREVMRLLTRFHQRGQTIVLVTHDARLASAADRVISFFDGRIADDAELDGTPSRGAGI
SGVLELRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-39 47
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-39 47
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-39 47
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-39 47
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 4e-16 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-27 42
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 6e-27 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SAV_6304 NP_827480.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-33 46
SAV_6304 NP_827480.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-40 46
SAV_6304 NP_827480.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-35 43
SAV_6304 NP_827480.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-38 42
SAV_6304 NP_827480.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-37 41