|
Name : clpC2 (SAV_4697) Accession : NP_825874.1 Strain : Streptomyces avermitilis MA-4680 Genome accession: NC_003155 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 5721983 - 5724508 bp Length : 2526 bp Strand : + Note : PF07724: ATPase family associated with various cellular activities (AAA) DNA sequence : ATGTTCGAGAGGTTCACCGACCGCGCGCGGCGGGTTGTCGTCCTGGCTCAGGAAGAAGCCCGGATGCTCAACCACAACTA CATCGGCACCGAGCACATCCTCCTGGGCCTGATCCACGAGGGTGAGGGTGTCGCCGCTAAGGCCCTGGAGAGCCTCGGGA TTTCGCTCGAGGCGGTCCGCCAGCAGGTGGAGGAGATCATCGGCCAGGGCCAGCAGGCCCCGTCCGGGCACATCCCCTTC ACTCCCCGTGCCAAGAAGGTCCTGGAGCTGTCGCTCCGCGAGGCCCTTCAGCTGGGCCACAACTACATCGGCACGGAGCA CATCCTGCTCGGCCTGATCCGTGAGGGCGAGGGTGTCGCCGCCCAGGTCCTGGTCAAGCTGGGCGCAGACCTCAACCGGG TGCGGCAGCAGGTCATCCAGCTGCTCTCCGGTTACCAGGGCAAGGAGACCGCCGCCGCCGGCGGTCCTGCCGAGGGCACC CCCTCCACGTCCCTGGTCCTCGACCAGTTCGGCCGGAATCTCACCCAGGCCGCTCGTGAGTCCAAGCTCGACCCGGTCAT CGGGCGCGAGAAGGAGATCGAGCGGGTCATGCAGGTGCTGTCCCGCCGTACGAAGAACAACCCGGTCCTGATCGGTGAGC CCGGTGTCGGCAAGACCGCCGTCGTCGAGGGCCTCGCTCAGGCGATCGTCAAGGGCGAGGTGCCCGAGACCCTCAAGGAC AAGCACCTCTACACCCTGGACCTGGGTGCGCTGGTCGCCGGTTCCCGCTACCGCGGTGACTTCGAGGAGCGCCTGAAGAA GGTGCTGAAGGAGATCCGCACCCGCGGCGACATCATCCTGTTCATCGACGAGCTGCACACGCTCGTCGGTGCGGGTGCCG CCGAGGGCGCCATCGACGCGGCTTCGATCCTGAAGCCGATGCTGGCCCGCGGTGAGCTGCAGACCATCGGCGCCACCACA CTCGACGAATACCGCAAGCACCTCGAGAAGGACGCGGCCCTCGAGCGCCGCTTCCAGCCGATCCAGGTGGCGGAGCCTTC CCTCCCCCACACGATCGAGATCCTCAAGGGCCTGCGCGACCGTTACGAGGCACACCACCGCGTCTCCATCACGGACGAGG CTCTCGTCCAGGCCGCGACGCTCGCGGACCGTTACATCTCGGACCGCTTCCTCCCGGACAAGGCGATCGACCTGATCGAC GAGGCGGGTTCCCGGATGCGGATCCGCCGGATGACCGCGCCGCCGGACCTGCGCGAGTTCGACGAGAAGATCGCGGGCGT GCGCCGCGACAAGGAGTCCGCGATCGACTCGCAGGACTTCGAGAAGGCGGCTTCTCTCCGCGACAAGGAGAAGCAGCTCC TGGCCGCGAAGGCCAAGCGGGAGAAGGAGTGGAAGGCCGGCGACATGGACGTCGTCGCCGAGGTCGACGGCGAGCTGATC GCCGAGGTCCTCGCGACCGCCACCGGCATCCCGGTCTTCAAGCTGACCGAGGAGGAGTCCTCGCGCCTGCTGCGCATGGA GGACGAGCTCCACAAGCGGGTCATCGGCCAGAAGGACGCCGTCAAGGCGCTCTCGAAGGCGATCCGTCGTACGCGTGCGG GTCTGAAGGACCCGAAGCGGCCGGGTGGTTCGTTCATCTTCGCGGGCCCGTCCGGTGTCGGTAAGACCGAGCTGTCCAAG GCGCTCGCCGAGTTCCTGTTCGGTGACGAGGACGCGCTGATCTCCCTCGACATGTCGGAGTTCAGCGAGAAGCACACGGT CTCGCGTCTGTTCGGTTCGCCTCCCGGCTACGTGGGCTACGAAGAGGGCGGGCAGCTGACCGAGAAGGTCCGCCGCAAGC CGTTCTCCGTCGTCCTGTTCGACGAGGTCGAGAAGGCCCACCCGGACATCTTCAACTCGCTGCTCCAGATCCTGGAGGAC GGTCGTCTGACCGACTCCCAGGGCCGGGTCGTGGACTTCAAGAACACGGTCATCATCATGACGACCAACCTCGGCACCCG GGACATCTCCAAGGGCTTCAACCTGGGCTTCGCCGCCCAGGGCGACACGAAGTCCAACTACGAGCGCATGAAGAACAAGG TCGCGGACGAGCTCAAGCAGCACTTCCGCCCCGAGTTCCTCAACCGCGTCGACGACGTGGTCGTCTTCCCGCAGCTCACC CAGGACGACATCCTCCGGATCGTCGACCTGATGATCACCAAGGTCGACGAGCGCCTCAAGGACCGGGACATGGGCATCGA ACTCGCCCAGTCCGCGAAGGAACTGCTCGCGAAGAAGGGTTACGACCCCGTTCTGGGCGCGCGGCCGCTGCGCCGCACGA TCCAGCGCGAGATCGAGGACACCCTCTCCGAGAAGATCCTCTTCGGGGAGCTGCGTCCGGGCCACATCGTGGTCGTCGAC ACGGAGGGCGAGGGCGAGACCAAGACCTTCACCTTCCGTGGCGAGGAGAAGTCGGCCCTGCCCGACGTCCCCCCGATCGA GCAGGCGGCCGGCGGCGCCGGTCCGAACCTGAGCAAGGACGCGTAA Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKALESLGISLEAVRQQVEEIIGQGQQAPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGADLNRVRQQVIQLLSGYQGKETAAAGGPAEGT PSTSLVLDQFGRNLTQAARESKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVKGEVPETLKD KHLYTLDLGALVAGSRYRGDFEERLKKVLKEIRTRGDIILFIDELHTLVGAGAAEGAIDAASILKPMLARGELQTIGATT LDEYRKHLEKDAALERRFQPIQVAEPSLPHTIEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLID EAGSRMRIRRMTAPPDLREFDEKIAGVRRDKESAIDSQDFEKAASLRDKEKQLLAAKAKREKEWKAGDMDVVAEVDGELI AEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQKDAVKALSKAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSK ALAEFLFGDEDALISLDMSEFSEKHTVSRLFGSPPGYVGYEEGGQLTEKVRRKPFSVVLFDEVEKAHPDIFNSLLQILED GRLTDSQGRVVDFKNTVIIMTTNLGTRDISKGFNLGFAAQGDTKSNYERMKNKVADELKQHFRPEFLNRVDDVVVFPQLT QDDILRIVDLMITKVDERLKDRDMGIELAQSAKELLAKKGYDPVLGARPLRRTIQREIEDTLSEKILFGELRPGHIVVVD TEGEGETKTFTFRGEEKSALPDVPPIEQAAGGAGPNLSKDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 77 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC2 | NP_825874.1 | ATP-dependent Clp protease | VFG0079 | Protein | 0.0 | 61 |
| clpC2 | NP_825874.1 | ATP-dependent Clp protease | VFG0080 | Protein | 3e-151 | 54 |
