Gene Information

Name : SAV_3379 (SAV_3379)
Accession : NP_824556.1
Strain : Streptomyces avermitilis MA-4680
Genome accession: NC_003155
Putative virulence/resistance : Virulence
Product : TetR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1309
EC number : -
Position : 4199236 - 4199886 bp
Length : 651 bp
Strand : -
Note : -

DNA sequence :
GTGGTTACCCAGAGATCCCCCAAGCTGGACAAGAAGCAGGTCGTCGAGACCGCCCTGCGGCTGCTCAACGAGGCCGGCCT
CGACGGGCTCACCCTCCGGGCCATCGCCAAGGAGCTGAACGTCCAGGCACCGGCCCTGTACTGGCACTTCAAGAACAAGC
AGGCGCTGCTCGACGAGATGGCGACGGAGATGTACCGCCGCATGACCGAGGGCGCGCACCTCGCCCCGGGCGCCTCCTGG
CAGGAGCGGCTGCTCCACGGCAACCGCGCGCTGCGCACCGCCCTGCTCGGCTACCGCGACGGTGCCAAGGTCTTCAGCGG
CTCCCGCTTCACCGGCACCGAACACGCGGTCCAGCTGGAAGCGAGCCTGCGCTCCCTGGTCGAAGCGGGCTTCGACCTCC
CCCAGGCCGTGCGCGCCACCTCCACGGCCTACTTCTTCACCCTCGGCTTCGTCACCGAGGAACAGGGCGTCGAGCCGCTG
CCGGGGGAGCGCCGCGAGGGCTACGACGTCGACGAGCGCGCCGCGCGCATGGCCGACTTCCCCCTCGCGGCGGCCGCGGG
CGCCGAGATCTTCCAGAACTACGAGGAGGGCTTCGAGGAAGGGCTGCGCCTGGTGATCGCGGGGATCGAGGCGCGGTACG
GGATCAGGTGA

Protein sequence :
MVTQRSPKLDKKQVVETALRLLNEAGLDGLTLRAIAKELNVQAPALYWHFKNKQALLDEMATEMYRRMTEGAHLAPGASW
QERLLHGNRALRTALLGYRDGAKVFSGSRFTGTEHAVQLEASLRSLVEAGFDLPQAVRATSTAYFFTLGFVTEEQGVEPL
PGERREGYDVDERAARMADFPLAAAAGAEIFQNYEEGFEEGLRLVIAGIEARYGIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetR1 YP_005176239.1 tetracycline repressor protein Not tested ICEPmu1 Protein 7e-25 44
tetR2 YP_005176247.1 tetracycline repressor protein Not tested ICEPmu1 Protein 7e-25 44
BJAB07104_00278 YP_008207743.1 Transcriptional regulator Not tested AbaR25 Protein 2e-25 42
BJAB0868_00282 YP_008211608.1 Transcriptional regulator Not tested AbaR26 Protein 2e-25 42
tetR AEA34668.1 tetracycline repressor protein Not tested Not named Protein 2e-25 42
tetR YP_005797161.1 tetracycline repressor protein class G Not tested AbaR4e Protein 3e-25 42
tetR(B) AEQ20906.1 tetracycline repressor protein Not tested Tn6166 Protein 3e-25 42
tetR AFH57203.1 repression protein Not tested AbaR4a Protein 2e-25 42
tetR(B) AEZ06046.1 repressor protein Not tested Tn6167 Protein 3e-25 42
tetR AFV47970.1 repressor protein TetR Not tested AbaR25 Protein 2e-25 42
tetR AFV47998.1 repressor protein TetR Not tested delta-AbaR25 Protein 2e-25 42
tetR AAL08444.1 tet repressor Not tested SRL Protein 1e-25 42
ABZJ_00261 YP_005524217.1 tetracycline repressor protein TetR Not tested AbaR22 Protein 3e-25 42
tetR(G) AGK06973.1 TetR(G) Not tested SGI1 Protein 5e-21 41
tetR(G) AGK07103.1 TetR(G) Not tested SGI1 Protein 5e-21 41
tetR AAK02050.1 tetracycline resistance regulator protein Not tested SGI1 Protein 5e-21 41
tetR ABZ01841.1 TetR Not tested SGI2 Protein 5e-21 41
tetR CAJ77033.1 Tetracycline repressor protein Not tested AbaR1 Protein 5e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SAV_3379 NP_824556.1 TetR family transcriptional regulator VFG1035 Protein 6e-26 42