Gene Information

Name : metB (SAV_3305)
Accession : NP_824481.1
Strain : Streptomyces avermitilis MA-4680
Genome accession: NC_003155
Putative virulence/resistance : Resistance
Product : cystathionine gamma-synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 2.5.1.48
Position : 4113526 - 4114680 bp
Length : 1155 bp
Strand : -
Note : catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine

DNA sequence :
ATGAGCGACAGGCACATCAGTCAGCACTTCGAGACCCTCGCGATCCACGCGGGCAACACCGCCGATCCCCTGACCGGCGC
GGTCGTCCCGCCGATCTACCAGGTCTCGACCTACAAACAGGACGGCGTCGGGGGGCTGCGCGGCGGCTACGAGTACAGCC
GCAGCGCCAACCCCACCAGGACCGCCCTGGAAGAGAACCTCGCCGCCCTCGAGGGCGGCCGCCGCGGCCTCGCGTTCGCG
TCCGGACTGGCGGCCGAGGACTGCCTGTTGCGTACGCTGCTCAGCCCCGGCGATCACGTGGTCATCCCCAACGACGCGTA
CGGCGGAACGTTCCGTCTCTTCGCGAAGGTCGTCTCCCGGTGGGGCGTGGAGTGGTCGGTCGCCGACACCAGCGACCCCG
AGGCCGTCCGGGCCGCGATCACCCCGAAGACCAAGGCCATCTGGGTGGAGACCCCGTCCAACCCGCTCCTCGGCATCACC
GACATCCCCGCGATCGCCCAGATCGCGCGCGAGGCCGGCGCCAAGCTGGTCGTCGACAACACCTTCGCCACCCCCTACCT
CCAGCAGCCGCTCGCGCTCGGCGCGGACGTCGTCGTGCACTCGCTGACCAAGTACATGGGCGGCCACTCGGACGTCGTCG
GCGGTGCGCTCGTGGTGAGTGACCAGGAGCTGGGCGAGGAGCTCGCCTACCACCAGAACGCGATGGGCGCGGTCGCCGGG
CCCTTCGACTCCTGGCTGGTACTGCGCGGCACCAAGACGCTCTCCGTGCGCATGGACCGGCACAGCGAGAACGCCACCAA
GGTCACGGAGATGCTCACCCGGCACGCGCGCGTGACGCGCGTTCTGTACCCGGGCCTGCCGGAGCACCCCGGTCACGAGA
TCGCCGCCAAGCAAATGCGGGCGTTCGGCGGCATGGTCTCCTTCCAGGTCGAGGGCGGCGAGGAGGCGGCCGTCGAGGTC
TGCAACCGCGCCAAGGTCTTCACCCTCGGCGAGTCCCTGGGCGGCGTCGAGTCCCTGATCGAGCACCCCGGGCGGATGAC
GCACGCGTCCGCGGCCGGCTCCGCGCTCGAGGTCCCCGCCGACCTCGTACGCCTCTCCGTGGGCATCGAGAACGTCGACG
ACCTGCTTCAGGACCTCCAGCAGGCCCTGGGCTAG

Protein sequence :
MSDRHISQHFETLAIHAGNTADPLTGAVVPPIYQVSTYKQDGVGGLRGGYEYSRSANPTRTALEENLAALEGGRRGLAFA
SGLAAEDCLLRTLLSPGDHVVIPNDAYGGTFRLFAKVVSRWGVEWSVADTSDPEAVRAAITPKTKAIWVETPSNPLLGIT
DIPAIAQIAREAGAKLVVDNTFATPYLQQPLALGADVVVHSLTKYMGGHSDVVGGALVVSDQELGEELAYHQNAMGAVAG
PFDSWLVLRGTKTLSVRMDRHSENATKVTEMLTRHARVTRVLYPGLPEHPGHEIAAKQMRAFGGMVSFQVEGGEEAAVEV
CNRAKVFTLGESLGGVESLIEHPGRMTHASAAGSALEVPADLVRLSVGIENVDDLLQDLQQALG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-75 48
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 5e-76 48
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 4e-59 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metB NP_824481.1 cystathionine gamma-synthase BAC0207 Protein 3e-61 44