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Name : yadB (YPO3398) Accession : YP_002348290.1 Strain : Yersinia pestis CO92 Genome accession: NC_003143 Putative virulence/resistance : Unknown Product : glutamyl-Q tRNA(Asp) synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0008 EC number : - Position : 3795916 - 3796881 bp Length : 966 bp Strand : + Note : this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the DNA sequence : GTGGTTCAACAAGCGGTCATTCAACGATCAGCTAACCAACGAGCAACGAATCAACCAACAGAATATATTGGCCGTTTTGC ACCTTCGCCATCAGGGGATTTGCATTTTGGTTCACTGATTGCCGCACTCGGGAGTTATCTGCAAGCCCGTGCTCAAGGCG GGAAGTGGTTAGTTCGTATTGAAGATATTGATCCTCCCCGTGAAGTTCCTGGCGCGGCCTCACGTATTTTAGCGGCCTTA GAGCATTATGGTCTCCATTGGGATGGCCCGGTTATCTATCAATCACAGCGCCATGAAGCGTATCGGGCCACGCTCAACTG GCTGGAACAGCAGGGATTAAGCTATTACTGCACCTGCACCCGTAGCCGCATCCACCAGCTCGGCGGGTTCTACGACGGCT ACTGCCGTGATCGTCATTTACCCGCTAGCGGCGCGGCTATCCGTTTGCGGCAGACTCAGCCGGTTTACGCTTTTTATGAT AAATTACTCGGCGAACTGCATGCTCACCCTGCGTTGGCACAAGAAGATTTTATTATCCGTCGCCGTGACGGTCTGTTCGC TTATAATCTGGCGGTGGTGGTGGATGATGCTTTTCAGGGCGTGACCGAAATTGTACGAGGTGCTGATTTGATTGAGCCGA CAGTGCGCCAGATAGCGCTCTATCAGCAGTTGCAACACCCTGTCCCCGGCTATATACACTTGCCGTTGGCGCTGAATAAT CAGGGGAATAAGCTCTCCAAGCAGAATCATGCTCCTCCCTTGCCTAATGGCGATCCACGTCCTATTTTAATCGACGCATT AAAGTTTTTACGCCAACCGCTACCGGAATACTGGCAAGATCTTGATTTGTATTTATTATTACGTTATGCCGTTAAGCATT GGACGTTGGTGTCAATCCCACTCCAGGGGGCAATAACCCCACAGAAAACACAACGGCATTCTCAAAGTAAGTATGGTGAG CTATGA Protein sequence : MVQQAVIQRSANQRATNQPTEYIGRFAPSPSGDLHFGSLIAALGSYLQARAQGGKWLVRIEDIDPPREVPGAASRILAAL EHYGLHWDGPVIYQSQRHEAYRATLNWLEQQGLSYYCTCTRSRIHQLGGFYDGYCRDRHLPASGAAIRLRQTQPVYAFYD KLLGELHAHPALAQEDFIIRRRDGLFAYNLAVVVDDAFQGVTEIVRGADLIEPTVRQIALYQQLQHPVPGYIHLPLALNN QGNKLSKQNHAPPLPNGDPRPILIDALKFLRQPLPEYWQDLDLYLLLRYAVKHWTLVSIPLQGAITPQKTQRHSQSKYGE L |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00313 | YP_008207778.1 | Glutamyl- and glutaminyl-tRNA synthetase | Not tested | AbaR25 | Protein | 3e-52 | 46 |
| BJAB0868_00317 | YP_008211643.1 | Glutamyl- and glutaminyl-tRNA synthetase | Not tested | AbaR26 | Protein | 3e-52 | 46 |
