Gene Information

Name : rdgC (YPO3212)
Accession : YP_002348114.1
Strain : Yersinia pestis CO92
Genome accession: NC_003143
Putative virulence/resistance : Unknown
Product : recombination associated protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 3578267 - 3579178 bp
Length : 912 bp
Strand : +
Note : Required for efficient pilin antigenic variation

DNA sequence :
ATGCTGTGGTTTAAGAATTTAATGGTTTACCGTTTGAGCCGGGAAGTTTCGCTGTCTGCGGATGAAATGGAGAAACAGCT
AAGCGCCTTTAGTTTCACGCCTTGTGGTAGTCAGGATATGGCGAAAACCGGTTGGGTATCACCGATGGGTTCGCACAGCG
ATGCATTAACTCACACCGTTAATGGTCAGATCGTTATTTGTGCGCGCAAAGAAGAGAAAATCTTACCGTCACCGGTGATT
AAGCAAGAGTTGCAGGACAAAATCGAACGGTTGGAAGGTGAACAGCACCGCAAACTGAAGAAAACTGAAAAAGATTCATT
GAAAGATGAAGTACTGCACAGTTTGTTGCCGCGTGCATTCAGCCGTTTTAATCAAACTTTTTTGTGGATTGATACTGTCA
ATGACCTGATTATGGTCGATGCCGCAAGTGCTAAACGGGCTGAAGATACATTGGCTTTGCTGCGTAAAAGCCTGGGGTCG
TTACCTGTCGTCCCGCTAACGTTAGAAAATCCGATTGAACTGACTTTGACTGAGTGGGTTCGATCCAAAACATTGCCTGC
AGGCTTTGCCCTGATGGACGAAGCTGAACTCAAAGCAATCTTGGAAGATGGCGGTGTTATTCGCTGTAAAAAACAGGATT
TATTCAGTGATGAGATCGCCGTACATATCGAAGCAGGCAAACTGGTCACTAAATTAGCGTTGGATTGGCAAGAACGGATA
CAGTTGGTGCTGTCTGACGATGGCTCATTAAAGCGTTTAAAATTCGCTGACACGCTACGTGATCAAAACGAAGATATTGA
TCGGGAAGATTTTGCACAACGTTTCGATGCCGATTTTATTCTGATGACCAGTGAGCTGGCCGCTTTGATTAAGAATCTCA
TTGAGGCCCTTGGCGGCGAAGCACAACACTGA

Protein sequence :
MLWFKNLMVYRLSREVSLSADEMEKQLSAFSFTPCGSQDMAKTGWVSPMGSHSDALTHTVNGQIVICARKEEKILPSPVI
KQELQDKIERLEGEQHRKLKKTEKDSLKDEVLHSLLPRAFSRFNQTFLWIDTVNDLIMVDAASAKRAEDTLALLRKSLGS
LPVVPLTLENPIELTLTEWVRSKTLPAGFALMDEAELKAILEDGGVIRCKKQDLFSDEIAVHIEAGKLVTKLALDWQERI
QLVLSDDGSLKRLKFADTLRDQNEDIDREDFAQRFDADFILMTSELAALIKNLIEALGGEAQH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 5e-93 64