Gene Information

Name : YPO1969 (YPO1969)
Accession : YP_002346957.1
Strain : Yersinia pestis CO92
Genome accession: NC_003143
Putative virulence/resistance : Unknown
Product : transposase/IS protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 2237397 - 2238149 bp
Length : 753 bp
Strand : +
Note : -

DNA sequence :
ATGGCGCTCGCCGGGCAGTTGCAACTGGAAAGCCTTATAAGCGCAGCGCCTGCGCTGTCACAACAGGCAGTAGACCAGGA
ATGGAGTTATATGGACTTCCTGGAGCATCTGCTTCATGAAGAAAAACTGGCACGTCATCAACGTAAACAGGCGATGTATA
CCCGAATGGCAGCCTTCCCGGCGGTGAAAACGTTCGAAGAGTATGACTTCACATTCGCCACCGGAGCACCGCAGAAGCAA
CTCCAGTCGTTACGCTCACTCAGCTTCATAGAACGTAATGAAAATATCGTATTACTGGGGCCATCAGGTGTGGGGAAAAC
CCATCTGGCAATAGCGATGGGCTATGAAGCAGTCCGTGCAGGTATCAAAGTTCGCTTCACAACAGCAGCAGATCTGTTAC
TTCAGTTATCTACGGCACAACGTCAGGGCCGTTATAAAACGACGCTTCAGCGTGGAGTAATGGCCCCCCGCCTGCTCATC
ATTGATGAAATAGGCTATCTGCCGTTCAGTCAGGAAGAAGCAAAGCTGTTCTTCCAGGTCATCGCTAAACGTTACGAAAA
GAGCGCAATGATCCTGACATCCAATCTGCCGTTCGGGCAGTGGGATCAAACGTTCGCCGGTGATGCAGCACTGACCTCAG
CGATGCTGGACCGTATCTTACACCACTCACATGTCGTTCAAATCAAAGGAGAAAGCTATCGACTCAGACAGAAACGAAAG
GCCGGGGTTATAGCAGAAGCTAATCCTGAGTAA

Protein sequence :
MALAGQLQLESLISAAPALSQQAVDQEWSYMDFLEHLLHEEKLARHQRKQAMYTRMAAFPAVKTFEEYDFTFATGAPQKQ
LQSLRSLSFIERNENIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTAQRQGRYKTTLQRGVMAPRLLI
IDEIGYLPFSQEEAKLFFQVIAKRYEKSAMILTSNLPFGQWDQTFAGDAALTSAMLDRILHHSHVVQIKGESYRLRQKRK
AGVIAEANPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 8e-116 100
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 8e-116 100
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 1e-115 100
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 8e-116 100
unnamed CAA21402.1 - Not tested HPI Protein 1e-115 100
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 8e-116 100
api84 CAF28558.1 putative transposase Not tested YAPI Protein 8e-116 100
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 8e-116 100
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 1e-115 100
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 1e-115 100
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 5e-86 100
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 6e-115 99
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 1e-115 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YPO1969 YP_002346957.1 transposase/IS protein VFG1515 Protein 5e-116 100
YPO1969 YP_002346957.1 transposase/IS protein VFG1627 Protein 5e-116 100
YPO1969 YP_002346957.1 transposase/IS protein VFG1606 Protein 5e-116 100
YPO1969 YP_002346957.1 transposase/IS protein VFG1460 Protein 3e-86 100
YPO1969 YP_002346957.1 transposase/IS protein VFG1663 Protein 4e-115 99