Gene Information

Name : caf1M (YPMT1.82)
Accession : NP_395428.1
Strain :
Genome accession: NC_003134
Putative virulence/resistance : Virulence
Product : putative F1 chaperone protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 82567 - 83343 bp
Length : 777 bp
Strand : +
Note : -

DNA sequence : 
ATGATTTTAAATAGATTAAGTACGTTAGGAATTATTACTTTCGGCATGCTTAGTTTTGCTGCGAACTCTGCTCAACCAGA
TATCAAATTCGCAAGCAAAGAGTATGGCGTGACTATAGGTGAGAGTAGGATCATATACCCGTTAGATGCTGCTGGCGTTA
TGGTCTCGGTGAAAAACACCCAAGATTATCCGGTTCTCATTCAGTCTAGGATCTACGACGAGAATAAAGAAAAAGAATCA
GAGGATCCTTTCGTGGTCACTCCGCCATTGTTTCGATTGGATGCTAAGCAACAAAATTCTTTGCGTATAGCTCAGGCTGG
AGGTGTTTTCCCGCGAGATAAAGAGAGCCTAAAGTGGTTATGCGTAAAAGGGATTCCACCAAAGGATGAAGATATATGGG
TTGATGATGCGACAAATAAGCAAAAATTCAATCCAGACAAAGATGTGGGAGTGTTCGTGCAATTCGCAATTAATAATTGC
ATTAAGCTTTTGGTTCGACCGAATGAATTAAAAGGAACCCCTATACAGTTTGCTGAAAACTTAAGCTGGAAAGTTGATGG
GGGGAAGCTAATTGCTGAAAACCCCTCACCTTTCTACATGAACATAGGTGAATTAACATTTGGAGGGAAAAGTATTCCTT
CTCACTATATTCCACCTAAATCGACGTGGGCTTTTGATTTGCCAAAAGGACTAGCGGGAGCACGTAATGTTTCGTGGAGA
ATAATTAATGATCAGGGAGGGTTGGATCGTTTGTATTCCAAAAATGTGACTTTATGA

Protein sequence : 
MILNRLSTLGIITFGMLSFAANSAQPDIKFASKEYGVTIGESRIIYPLDAAGVMVSVKNTQDYPVLIQSRIYDENKEKES
EDPFVVTPPLFRLDAKQQNSLRIAQAGGVFPRDKESLKWLCVKGIPPKDEDIWVDDATNKQKFNPDKDVGVFVQFAINNC
IKLLVRPNELKGTPIQFAENLSWKVDGGKLIAENPSPFYMNIGELTFGGKSIPSHYIPPKSTWAFDLPKGLAGARNVSWR
IINDQGGLDRLYSKNVTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 5e-49 42
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 5e-49 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
caf1M NP_395428.1 putative F1 chaperone protein VFG0420 Protein 9e-119 100
caf1M NP_395428.1 putative F1 chaperone protein VFG0943 Protein 8e-44 43