Gene Information

Name : YPCD1.94 (YPCD1.94)
Accession : NP_395223.1
Strain :
Genome accession: NC_003131
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 67222 - 68031 bp
Length : 810 bp
Strand : +
Note : -

DNA sequence : 
GTGGAATATCTGCTGGCGGCGTACCGTATCGGAGTACGCAGAGGGTGCAGGCTGATGATGCAGAGCCGCACTGTATACAA
CTATCGTAGCCATCGTGACGATCGGGCTATTACTCAGCGAATACGGGAAATTGCGGAGACGCGCATCCGTTATGGCTGTC
CGCGCATTCATATCCTGCTGCGGAGAGAAGGCTGGCTTGTTAACCATAAGAAAACGCACCGTATTTACTGTCTTGAGGGT
CTCAATCTACGTTCGAAACGTCCACGGCGGCATGTGACAGCGAAGCACAGGCACGCACGTCCAGAAGTGACCGCGTTAGA
GCAGTGCTGGAGCATGGATTTCGTTGCTGATAATCTGTTCAACGGGCGTCGGGTCAGGGCGCTAACTATAGTGGATAATT
TTAGTCGTGAATGTCTGGCGATCGAGGTCGGTCAGGGGTTACGTGGAGATGATGTTGTGGCTGTCATGGACAGATTAAAA
CATTCGCTGGGGCGTATTCCACAAAGGCTGCAGACAGATAACGGCAGCGAATTCATCTCGAAGTCGATGGACCGATGGGC
GTATGAAAACAGGGTCACGATGGACTGTTCACGCCCCGGAAAGCCTACAGATAATGCCTTTATCGAGTCATTTAATGGCA
GTCTGAGGGATGAATGTCTGAACGTGCACGGGTTCCTTTCTCTGGAAGATGCTCAGGAGAAAATTGAACAATGGCGGCAA
GAATATAATCATTTTCATCCGCATTCTTCGTTAAATAACCTGACTCCGGCAGAATTTGCCCGAAGTCATCAAAAAGGTCC
GGATCTCTGA

Protein sequence : 
MEYLLAAYRIGVRRGCRLMMQSRTVYNYRSHRDDRAITQRIREIAETRIRYGCPRIHILLRREGWLVNHKKTHRIYCLEG
LNLRSKRPRRHVTAKHRHARPEVTALEQCWSMDFVADNLFNGRRVRALTIVDNFSRECLAIEVGQGLRGDDVVAVMDRLK
HSLGRIPQRLQTDNGSEFISKSMDRWAYENRVTMDCSRPGKPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQ
EYNHFHPHSSLNNLTPAEFARSHQKGPDL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 2e-50 53
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 1e-37 48
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 3e-47 46
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 3e-46 42
EXB25 ABD94712.1 hypothetical protein Not tested ExoU island B Protein 2e-24 42