Gene Information

Name : virF (YPCD1.49)
Accession : NP_395183.1
Strain :
Genome accession: NC_003131
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 36112 - 36927 bp
Length : 816 bp
Strand : +
Note : LCR activator; putative thermoregulatory protein

DNA sequence : 
ATGGCATCACTAGAGATTATTAAATTAGAATGGGTCACACCTATATTTAAGGTTGTTGAGCATTCACAAGATGGCCTATA
TATTCTTTTGCAAGGTCAGATTTCATGGCAGAGCAGCGGTCAGACATATGATTTAGATGAGGGGAATATGCTGTTTTTGC
GTCGTGGCAGCTATGCTGTTCGATGTGGTACAAAAGAACCCTGCCAATTACTTTGGATTCCATTACCCGGCAGTTTTTTG
AGTACTTTTTTGCATCGCTTTGGTTCTTTGCTTAGTGAAATTGGACGAGACAACTCCACACCCAAACCATTGTTAATTTT
TAATATTTCACCAATATTATCACAATCCATTCAAAATCTATGTGCCATATTGGAACGGAGTGATTTTCCGTCAGTATTAA
CGCAACTGCGTATTGAGGAATTACTGCTTTTGCTTGCCTTTAGCTCGCAAGGGACTTTATTTCTCTCGGCTCTGCGCCAT
TTAGGCAACCGCCCAGAAGAACGGTTGCAAAAATTTATGGAGGAAAATTATCTACAAGGGTGGAAGCTAAGCAAATTTGC
GCGAGAATTCGGCATGGGATTAACCACATTCAAAGAACTGTTTGGTACAGTTTATGGCATTTCACCACGCGCCTGGATAA
GCGAGCGACGTATTCTCTATGCTCACCAATTACTTCTTAATGGTAAGATGAGTATTGTTGATATTGCCATGGAAGCGGGG
TTCTCGAGTCAGTCTTATTTCACTCAAAGTTATCGACGTCGCTTCGGATGCACTCCAAGCCAAGCCCGTCTTACTAAAAT
AGCAACCACAGGCTAA

Protein sequence : 
MASLEIIKLEWVTPIFKVVEHSQDGLYILLQGQISWQSSGQTYDLDEGNMLFLRRGSYAVRCGTKEPCQLLWIPLPGSFL
STFLHRFGSLLSEIGRDNSTPKPLLIFNISPILSQSIQNLCAILERSDFPSVLTQLRIEELLLLLAFSSQGTLFLSALRH
LGNRPEERLQKFMEENYLQGWKLSKFAREFGMGLTTFKELFGTVYGISPRAWISERRILYAHQLLLNGKMSIVDIAMEAG
FSSQSYFTQSYRRRFGCTPSQARLTKIATTG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscA AAO18036.1 LscA Virulence TTSS locus Protein 5e-82 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
virF NP_395183.1 transcriptional regulator VFG0399 Protein 2e-121 100
virF NP_395183.1 transcriptional regulator VFG0208 Protein 1e-70 57