Gene Information

Name : yscY (YPCD1.35c)
Accession : NP_395169.1
Strain :
Genome accession: NC_003131
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4783
EC number : -
Position : 25784 - 26128 bp
Length : 345 bp
Strand : -
Note : Orf44 (o114); similar to gi|1197038; putative type III secretion protein

DNA sequence :
ATGAATATTACTTTAACCAAACGACAACAGGAGTTCTTGCTGCTCAACGGTTGGTTACAACTACAATGTGGCCATGCAGA
GCGCGCATGTATTCTATTGGACGCCTTGCTGACGTTAAATCCTGAGCATTTAGCCGGTCGGCGTTGCCGATTAGTCGCGC
TACTTAATAATAACCAGGGAGAACGTGCCGAAAAAGAAGCGCAATGGCTAATATCACATGACCCTTTACAGGCTGGGAAT
TGGCTCTGTTTGAGCCGCGCCCAACAACTGAACGGCGATCTTGATAAGGCTCGCCATGCTTATCAACATTATTTGGAGTT
GAAAGATCATAATGAATCCCCATGA

Protein sequence :
MNITLTKRQQEFLLLNGWLQLQCGHAERACILLDALLTLNPEHLAGRRCRLVALLNNNQGERAEKEAQWLISHDPLQAGN
WLCLSRAQQLNGDLDKARHAYQHYLELKDHNESP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssC AAO18049.1 LssC Virulence TTSS locus Protein 9e-13 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yscY NP_395169.1 hypothetical protein VFG0385 Protein 3e-47 100
yscY NP_395169.1 hypothetical protein VFG0197 Protein 9e-05 46