Gene Information

Name : lcrR (YPCD1.33c)
Accession : NP_395167.1
Strain :
Genome accession: NC_003131
Putative virulence/resistance : Virulence
Product : low calcium response protein R
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 23246 - 23686 bp
Length : 441 bp
Strand : -
Note : -

DNA sequence : 
ATGATGGCAGATCCTTTAATTCCGTGGCTTACCGAACATGGCTTGGTTTGCCACCCTCATACTTTGTCTGGCACCCCCAT
TTCTTTAGGTTCGGCCTTTCAATTAGCTGGCCTCAAGCTTGCATGGCGCGTAGAAATTGAACAAAGGCGGGTTTGGATCG
TGCTTATCCAACGAGTGGAACAACGTCGAGGGCTGAAAAATCCCTTCGCGGCACTTTATATGTTAGCTAATGCAGCGCGG
GCCGTTCTTGGCCCTGACTATTATCTGTATGGCAATGTCGATGTACTGGCGGGGAGTTCTCTCAGTACGCAACGGCTCGC
TCATTTTTATCGGCGTTGGACCGGGGCCAAAGAATTAAGCACCGGGTGGTTCTCACTAAAAGTATCACAAGTCATCACCT
TATCTAATATGAAAAAGCGACAAAACAACGGCTTTGCCTGA

Protein sequence : 
MMADPLIPWLTEHGLVCHPHTLSGTPISLGSAFQLAGLKLAWRVEIEQRRVWIVLIQRVEQRRGLKNPFAALYMLANAAR
AVLGPDYYLYGNVDVLAGSSLSTQRLAHFYRRWTGAKELSTGWFSLKVSQVITLSNMKKRQNNGFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssR AAO18051.1 LssR Virulence TTSS locus Protein 4e-26 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lcrR NP_395167.1 low calcium response protein R VFG0383 Protein 3e-59 100
lcrR NP_395167.1 low calcium response protein R VFG0199 Protein 1e-26 52