Gene Information

Name : ctrC (NMB0073)
Accession : NP_273137.1
Strain : Neisseria meningitidis MC58
Genome accession: NC_003112
Putative virulence/resistance : Virulence
Product : capsule polysaccharide export inner-membrane protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1682
EC number : -
Position : 82735 - 83532 bp
Length : 798 bp
Strand : +
Note : identified by similarity to EGAD:15907; match to protein family HMM PF01061

DNA sequence : 
ATGAAAGCCTTGCATAAAACATCATTTTGGGAATCTTTAGCCATTCAAAGGCGCGTAATCGGTGCGCTGTTGATGCGGGA
AATTATCACCCGTTACGGTCGCAATAATATTGGCTTTTTATGGCTGTTTGTTGAGCCGTTGCTGATGACATTCGTTATCG
TCTTGATGTGGAAATTTTTAAGGGCAGACCGATATTCAACTTTGAATATTGTCGCATTTGCGATTACTGGCTATCCGATG
TTGATGATGTGGCGTAATGCCTCAAAACGGGCAGTTGGGTCGATTTCTTCAAATGCCAGCTTGCTTTATCACCGCAATGT
AAGAGTTTTGGATACCATCTTGGCGCGCATGATTTTGGAAATTGCTGGTGCAACCATTGCGCAGATTGTGATTATGGCGG
TATTGATTGCGATTGGCTGGATTGAAATGCCGGCAGATATGTTTTATATGCTGATGGCTTGGCTTTTGATGGCTTTTTTT
GCGATTGGTTTGGGTTTGGTGATTTGTTCGATTGCCTTTAATTTCGAGCCGTTTGGCAAGATTTGGGGCACATTGACTTT
TGTGATGATGCCGTTATCCGGTGCGTTCTTTTTTGTGCATAATTTGCCGCCCAAGGTACAAGAATATGCATTAATGATTC
CGATGGTGCATGGCACAGAAATGTTCCGTGCCGGATATTTTGGCAGCGATGTAATTACCTATGAAAATCCTTGGTATATC
GTATTGTGCAATCTGGTGTTGTTGTTGTTTGGCTTGGCGATGGTCAGTAAATTCAGTAAAGGAGTCGAGCCGCAATGA

Protein sequence : 
MKALHKTSFWESLAIQRRVIGALLMREIITRYGRNNIGFLWLFVEPLLMTFVIVLMWKFLRADRYSTLNIVAFAITGYPM
LMMWRNASKRAVGSISSNASLLYHRNVRVLDTILARMILEIAGATIAQIVIMAVLIAIGWIEMPADMFYMLMAWLLMAFF
AIGLGLVICSIAFNFEPFGKIWGTLTFVMMPLSGAFFFVHNLPPKVQEYALMIPMVHGTEMFRAGYFGSDVITYENPWYI
VLCNLVLLLFGLAMVSKFSKGVEPQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrC NP_273137.1 capsule polysaccharide export inner-membrane protein Not tested IHT-A Protein 5e-115 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ctrC NP_273137.1 capsule polysaccharide export inner-membrane protein VFG0257 Protein 2e-115 100
ctrC NP_273137.1 capsule polysaccharide export inner-membrane protein VFG0685 Protein 6e-85 71
ctrC NP_273137.1 capsule polysaccharide export inner-membrane protein VFG0697 Protein 6e-85 71
ctrC NP_273137.1 capsule polysaccharide export inner-membrane protein VFG2564 Protein 1e-44 45