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Name : NMB1747 (NMB1747) Accession : NP_274748.1 Strain : Neisseria meningitidis MC58 Genome accession: NC_003112 Putative virulence/resistance : Unknown Product : tspB protein Function : - COG functional category : A : RNA processing and modification COG ID : COG5186 EC number : - Position : 1828069 - 1829574 bp Length : 1506 bp Strand : + Note : identified by similarity to GP:3758871; match to protein family HMM PF05616 DNA sequence : ATGTATGCACTTTCGGAAAAATATAACGATAATGGATTTAAGGCATACAAAGTTTTAGGTGAGGGAGGAGGAATTCATAC AGAATATAATTACAAATTTGATAAAAGTTTGAATTTGAATGTATTAGAAAGTTCAACAGGCGCACGCTCTCTTGAAAAAG TCCCCGTTAAAGTAACTGCATCAGTTTCCCGCGCCGCCGTCTTGTCAGGAGTCGGCAAACTTGCCCGCTTAGGCGCGAAA TTAAGCACAAGGGCAGTTCCTTATGTCGGAACAGCCCTTTTAGCCCATGACGTATACGAAACTTTCAAAGAAGACATACA GGCACAAGGCTACCAATACGACCCCGAAACCGACAAATTTGTAAAAGGCTACGAATATAGTAATTGCCTTTGGTACGAAG ACAAAAGACGTATTAATAGAACCTATGGCTGCTACGGCGTTGACAGTTCGATTATGCGCCTTATGTCCGATGACAGCAGA TTCCCCGAAGTCAAAGAATTGATGGAAAGCCAAATGTATAGGCTGGCACGTCCGTTTTGGAATTGGCATAAAGAAGAACT GAATAAATTAAGTTCTTTGGATTGGAATAATTTTGTTTTAAATCGTTGCACATTTAATTGGAATGGCGGAGATTGTTTGG TCAATAAAGGTGATGATTTCAGAAATGGGGCTGATTTTTCCCTTATTCGCAATTCAAAATACAAAGAAGAAATGGATGCC AAAAAGCTGGAAGAGATTTTATCGTTGAAAGTCGATGCCAATCCCGACAAATACATAAAGGCAACCGGTTATCCCGGTTA TTCCGAAAAAGTAGAAGTCGCACCCGGAACAAAAGTGAATATGGGTCCCGTCACGGACAGGAACGGGAATCCCGTTCAGG TTGTCGCAACATTCGGCAGGGATTCGCAAGGCAACACCACGGTGGATGTTCAAGTAATCCCGCGTCCCGACTTGACCCCC GGAAGCGCGGAAGCACCGAACGCACAGCCGCTGCCCGAAGTATCGCCCGCCGAAAACCCCGCAAACAACCCGAACCCCAA TGAGAACCCCGGCACGAGCCCCAATCCCGAACCCGACCCCGATTTGAATCCCGATGCAAATCCCGATACGGACGGACAGC CCGGCACAAGACCCGATTCCCCCGCCGTTCCGGACCGCCCAAACGGTAGGCATCGCAAAGAAAGGAAAGAAGGCGAAGAC GGCGGGCTTTTGTGCGATTATTTTCCGGAAATCCTAGCCTGTCAGGAGATGGGCAAACCTTCAGACGGCATGTTTCACGA TATAAGCATACCGCAGGTTATAGACGATAAAACATGGTCTTCACATAACTTTTTACCGTCTAACGGCGTATGTCCGCAGC CGAAAACCTTTCATGTTTTCGGTAGGCAATATCAGGCAAGCTATGAGCCGTTATGCGTGTTTGCCGAAAAAATCCGTTTT GCCGTACTGCTCGCCTTTATCATTATGTCGGCTTTTGTCGTTTTCGGTTCGTTGAAGGGGAAATAA Protein sequence : MYALSEKYNDNGFKAYKVLGEGGGIHTEYNYKFDKSLNLNVLESSTGARSLEKVPVKVTASVSRAAVLSGVGKLARLGAK LSTRAVPYVGTALLAHDVYETFKEDIQAQGYQYDPETDKFVKGYEYSNCLWYEDKRRINRTYGCYGVDSSIMRLMSDDSR FPEVKELMESQMYRLARPFWNWHKEELNKLSSLDWNNFVLNRCTFNWNGGDCLVNKGDDFRNGADFSLIRNSKYKEEMDA KKLEEILSLKVDANPDKYIKATGYPGYSEKVEVAPGTKVNMGPVTDRNGNPVQVVATFGRDSQGNTTVDVQVIPRPDLTP GSAEAPNAQPLPEVSPAENPANNPNPNENPGTSPNPEPDPDLNPDANPDTDGQPGTRPDSPAVPDRPNGRHRKERKEGED GGLLCDYFPEILACQEMGKPSDGMFHDISIPQVIDDKTWSSHNFLPSNGVCPQPKTFHVFGRQYQASYEPLCVFAEKIRF AVLLAFIIMSAFVVFGSLKGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB1747 | NP_274748.1 | tspB protein | Not tested | IHT-C | Protein | 0.0 | 100 |
| tspB | YP_001598322.1 | TspB protein | Not tested | MDA | Protein | 3e-137 | 80 |
