Gene Information

Name : ABC-NDB (spr1202)
Accession : NP_358795.1
Strain : Streptococcus pneumoniae R6
Genome accession: NC_003098
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1197693 - 1198451 bp
Length : 759 bp
Strand : -
Note : -

DNA sequence : 
GTGATTGGAGGCAAGAATATGGATAAAGATTATATATTAAAAGTGAAAGGGCTGTATCATCAATTTTTACTAGGAAATAA
TAAAACGTTGCAAGTGCTGAAAAATGTTTCTCTTTCTGCTTCGAGAGGAGAATTTATAAGTATTCTAGGAATTAGTGGTT
CTGGAAAGTCAACTTTATTAAAATGTATTTCTAGTTTGCTTGAACCAACAAGTGGGGAAGTAATTTTAAATGGAATCAAC
CCCTATAAAATCAGAAATGCAAAATTGTCAAGTATAAGACGTAACGAAGTATCTTTTATATTTCAAGCATACAATTTAAT
ACCTTCCCTGCCGGTAATAGAAAATATAGCACTTCCTTTGCGATTATCACAAAAAAAATTAACTATTAAAAATGTAGAAA
ACTTACTCAAAAGAATGAAGTTTAATGCTGGCTTAAACGATTTTGTTGGAACTCTGTCTGGTGGAGAACAACAGAAGGTT
GCTATAGCTAGAGCGGTTATTGCTGATAGTGATATAATATTTGCTGATGAGCCAACTGGGGCTTTAGACAGCGTTTCTCG
TGAAGTAATTTTTGAATTATTGAGAGAGTTAGTAGGGGCGGGTAAGTGTGTAATTATGGTAACGCACGATATAGAATTGG
CCTCGAAAACTGATCGTGCATTAATATTGAAAGATGGAAAAATTTTCAAAGAACTTCATAGACCTAGCGGGGAAGAGTTG
TATAAAATCTTAGAGGTACAATCAACTACGGAGGAATAG

Protein sequence : 
MIGGKNMDKDYILKVKGLYHQFLLGNNKTLQVLKNVSLSASRGEFISILGISGSGKSTLLKCISSLLEPTSGEVILNGIN
PYKIRNAKLSSIRRNEVSFIFQAYNLIPSLPVIENIALPLRLSQKKLTIKNVENLLKRMKFNAGLNDFVGTLSGGEQQKV
AIARAVIADSDIIFADEPTGALDSVSREVIFELLRELVGAGKCVIMVTHDIELASKTDRALILKDGKIFKELHRPSGEEL
YKILEVQSTTEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-35 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-35 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-30 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ABC-NDB NP_358795.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-26 41