Gene Information

Name : dctM (SM_b21351)
Accession : NP_437467.1
Strain :
Genome accession: NC_003078
Putative virulence/resistance : Virulence
Product : C4-dicarboxylate large membrane transport protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1593
EC number : -
Position : 1016547 - 1017830 bp
Length : 1284 bp
Strand : -
Note : Product confidence : Gene name confidence :

DNA sequence :
ATGGACATGATGATCCTCTTCGGCGTGTTCACGCTGCTGATGTTGATCGGCACGCCGATCGCCTTCTGCCTCGGCGTCGC
GTCCTTCGCGACGGTTCTTTATCTGGGGCTGCCGCCGCTGGTGATCTTTCAGCGGCTCAATTCCGGCATGAGCGTGTTTT
CGCTGCTTGCCATTCCCTTCTTCATCTATGCCGGCGATCTGATGGTGCGTGGCGGGATCGCCCAGAAGATCGTCGCCTTC
GCGGCTTCACTGGTCGGGCACATCCGGGGCGGGCTCGGTCAGGTCAACATCGTCACCGCAACGCTGTTCGGCGGCATTTC
CGGCTCGGCCGTGGCGGAAGCGGCCGCTGTAGGCGGGCTCATGATCCCGCAGATGAAACAGCGCGGTTACGGCGCGGACT
ACGCCGTCAACGTTACCTCGATGGCGGCCTTGATCGCGCTGATGCTGCCGCCTTCGCACAACATGATCATCTACTCGATC
TCGGCAGGCGGAAAGATCTCGATCGCAGATCTCTTCACCGCCGGCATCCTTCCCGGCCTCCTTTACGCTGCCGCACTGAT
GGCCACCGCCTATTTCGTTGCGCGCCGGCGCGGCTATCCGACCGAGGTCTTCCCCGGGTTCGCCAGGGTCGGGCGCTACC
TGCTGATTTCGACGCCCGGCCTCCTGCTCATCGGCATCATCTTCGGGGGCGTACGTTCGGGTGTGTTCACCGCGACCGAG
AGTTCCTGCATCGCCGTTCTCTATGCGCTTGCGGTGACCGTCTTCGTCTATCGGCAGATGACCTGGCAGGACTTCGTCCA
GGCAACCTTCGCGGCCGTGCGCACGACGGCCATGGTCCTGCTCATCATCGGCATGGCGGCCGCCTTCTCCTGGTTGATGG
CGTTCCTGAGAGTGCCCGCAGCGCTGATCGACTGGATGAACACGATCTCGGAAAATCCGATCATCATACTCCTATTGCTC
AACGTTCTGATGTTGTTCCTCGGCACCTTCATGGACATGGGCCCGACCATCATCATCTGCACCCCGATCTTCCTGCCGGT
CGCCATGGCCTACGGCGTCGACCCGGTCCATTTCGGCGTCATCATGATCCTAAACTTCGGCATCGGACTCAACACGCCGC
CTGTGGGCGCCGTGCAGTTCGTCGCCTGTGCAGTCGGGAAGATCTCCGTCTGGGAGGCGATGCGCAGCATATGGCCGTTC
TACCTGGCCGGGTTGATCGTCCTCGGGCTCGTCACCTATGTTCCGGCCCTTTCTCTATGGCTGCCGGCCGTCTTCAAAGG
GTGA

Protein sequence :
MDMMILFGVFTLLMLIGTPIAFCLGVASFATVLYLGLPPLVIFQRLNSGMSVFSLLAIPFFIYAGDLMVRGGIAQKIVAF
AASLVGHIRGGLGQVNIVTATLFGGISGSAVAEAAAVGGLMIPQMKQRGYGADYAVNVTSMAALIALMLPPSHNMIIYSI
SAGGKISIADLFTAGILPGLLYAAALMATAYFVARRRGYPTEVFPGFARVGRYLLISTPGLLLIGIIFGGVRSGVFTATE
SSCIAVLYALAVTVFVYRQMTWQDFVQATFAAVRTTAMVLLIIGMAAAFSWLMAFLRVPAALIDWMNTISENPIIILLLL
NVLMLFLGTFMDMGPTIIICTPIFLPVAMAYGVDPVHFGVIMILNFGIGLNTPPVGAVQFVACAVGKISVWEAMRSIWPF
YLAGLIVLGLVTYVPALSLWLPAVFKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 2e-41 41
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 2e-41 41
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 1e-41 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
dctM NP_437467.1 C4-dicarboxylate large membrane transport protein VFG1110 Protein 8e-42 41