Gene Information

Name : SM_b20141 (SM_b20141)
Accession : NP_436681.1
Strain :
Genome accession: NC_003078
Putative virulence/resistance : Unknown
Product : oligopeptide ABC transporter ATP-binding protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG1123
EC number : -
Position : 154809 - 156455 bp
Length : 1647 bp
Strand : -
Note : -

DNA sequence :
ATGGCTGAACATCTGCTCGAGGTCCGTAACCTCTCCGTCGAATTCCACACCGCGGCGGGCGTGGTCCATGCGGTGAAGTC
GATCTCCTATCACCTCGACAAAGGCGAGACGCTGGCAATCCTCGGCGAAAGCGGTTCCGGCAAGTCCGTCTCGTCCTCGG
CGATCATGAACCTCATCGACATGCCGCCGGGCCGCATCAGTAGCGGCGAAATCCTGCTCGACGGCAGGGACCTGCTGACG
ATGCCTGCCGAGGAACGGCGCGAAGTCAACGGCCGCCGGGTCGCCATGATCTTTCAGGATCCGCTCAGCCACCTCAATCC
GGTCTACAGCGTCGGCTGGCAGATCTCCGAAGCCATGACCACTCACGGGCTCGCCGGCAGCAAGGCGCGCGAAGAGGCGC
TGCGGCTCCTTCGCCGCGTCGGAATCCCCGAGCCCGAGCGGGCAATGCGCAAATATCCGCACGAATTCTCCGGCGGTCAG
CGCCAGCGCGTCATGATCGCCATGGCGCTGGCGCTCCGGCCGGACCTCCTGATCGCCGACGAACCGACCACCGCGCTCGA
CGTGACCGTGCAGGCGGAAGTGCTGAAGCTTCTGAAGGAACTGCAGCGCGAAACGGGCATGGCGGTGCTGATCATCACCC
ACGATCTCGGCGTCGTCTCCGAGATCGCCGACCGGGTCGTCGTGATGGAAAAGGGCGCCATCGTCGAAGCGGGAACCGTG
CGCGAGATCTACAAGAACCCGCAGCATCCCTATACGCAGAAGCTCATCGCCGCCGCCCCCGGCAAGGGCGCGATGCACGA
ACCCGGCGCGCGCGCCGAACCCCTGCTCAGCGTGCGCGACGTGCGCAAGACCTACGGCTCCTTCGAAGCGCTGAAGGGCA
TCTCCTTCGATCTGATGCCCGGCGAGACCATGGCTGTCGTCGGAGAGAGCGGCTCCGGCAAATCGACGCTTGCCCGGGCC
CTTTTGCGTCTCGACGAGCCGGACAGCGGCACGGCGCTCTGGAAGGGCCGCGACCTGTTCGCGCTTTCGCCGGCAGAGCT
CTACAAGCTCAGGCGCGACCTCCAGATGGTGTTCCAGGACCCGACCCAGTCGCTCAACCCGCGCATGACGGTCTACCAGC
TGATCTCCGAGGCATGGGTCATCCATCCGGACATCCTGCCCAAGGCAAAGTGGCGTGAACGCGTCGCGGAGCTCCTGGTG
CAGGTCGGTCTTTCGGCCGAGCACATGAGCCGCTATCCGCACCAGTTTTCCGGCGGCCAGCGGCAGCGCATCGCCATTGC
CCGGGCGCTTGCGCTCGAGCCGCAGCTGATCATCTGCGACGAGGCCGTTTCCGCGCTCGACGTCTCCGTCCAGGCGCAGG
TGATCGAGCTTCTCGACAGGCTGCGCCGCGAGATGGGGATCGCCTTCATCTTCATCGCCCATGACCTGCCGGTCGTTCGC
GATTTCGCCGATTACGTCATGGTCATGCAGCAGGGAGAGGTCGTCGAGCTCGGCACCGTCCGCGAGGTCTTCGATACGCC
GCGGCAGGCCTATACCCGCGCCCTTCTCGCGGCCAGCCTCAGTCCCGATCCGGATGCAAAGGCCGGCCACCTAGCATCGG
TGCCGGCCGAGGCTGCCGACATTCTTATCCCAAAGCGGAGTCACTGA

Protein sequence :
MAEHLLEVRNLSVEFHTAAGVVHAVKSISYHLDKGETLAILGESGSGKSVSSSAIMNLIDMPPGRISSGEILLDGRDLLT
MPAEERREVNGRRVAMIFQDPLSHLNPVYSVGWQISEAMTTHGLAGSKAREEALRLLRRVGIPEPERAMRKYPHEFSGGQ
RQRVMIAMALALRPDLLIADEPTTALDVTVQAEVLKLLKELQRETGMAVLIITHDLGVVSEIADRVVVMEKGAIVEAGTV
REIYKNPQHPYTQKLIAAAPGKGAMHEPGARAEPLLSVRDVRKTYGSFEALKGISFDLMPGETMAVVGESGSGKSTLARA
LLRLDEPDSGTALWKGRDLFALSPAELYKLRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPDILPKAKWRERVAELLV
QVGLSAEHMSRYPHQFSGGQRQRIAIARALALEPQLIICDEAVSALDVSVQAQVIELLDRLRREMGIAFIFIAHDLPVVR
DFADYVMVMQQGEVVELGTVREVFDTPRQAYTRALLAASLSPDPDAKAGHLASVPAEAADILIPKRSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 5e-92 44
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-74 42
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-74 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 3e-74 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 3e-74 42