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Name : SM_b20780 (SM_b20780) Accession : NP_438012.1 Strain : Genome accession: NC_003078 Putative virulence/resistance : Virulence Product : reverse transcriptasematurase of intron RmInt1 protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3344 EC number : - Position : 1574695 - 1575954 bp Length : 1260 bp Strand : - Note : - DNA sequence : ATGACTTCGGAAAGTACGACAGACAAGCCGTTTCGAATTGAGAAACGTCGAGTGTACGAAGCTTACAAAGCGGTCAAAGC CAACCGTGGCGCGGCCGGGGTGGACGGGCAGACGCTGGAGATATTTGAGAAAGACCTTGCAGCAAACCTCTACAAGATCT GGAATCGGATGTCCTCGGGAACCTACTTCCCGCCGCCGGTGCGCGCCGTCTCCATTCCGAAGAAGGCTGGAGGCGAAAGG GTTTTGGGTGTGCCCACGGTCAGCGATCGGATCGCGCAGATGGTGGTCAAGCAGATGATCGAGCCGGATTTGGACTCCCT CTTTCTTCCGGACTCCTACGGTTACAGGCCGGGAAAATCGGCCCTGGATGCCGTCGGAGTGACGCGTCAGCGGTGCTGGA AGTATGATTGGGTTTTGGAATTCGACATCAAAGGGCTATTTGACAATCTTCCGCATGATCTCTTGCTGAAGGCGGTCAGA AAAGACGTCAAATGCAACTGGGCTCTGCTCTACATCGAAAGATGGCTGACTGCGCCTATGGAAAAGAACGGAGAAGTCAT CGAGCGGTCACGCGGTACCCCACAGGGAGGCGTGGTTAGCCCGATCTTGGCGAATCTCTTTCTGCACTATGCATTTGATC TCTGGATGACGCGGACGCATCCCGACCTTCCATGGTGTCGATATGCCGACGATGGTCTTGTTCACTGCCAGAGCGAGCAA CAAGCCGAAGCCCTCAAGGTGGAGCTGAGTTCTCGGCTGGCAGCGTGCGGACTTCAGATGCATCCGACAAAGACCAAGAT TGTCTACTGCAAGGATCAACGGCGCAGGGAGGCGTATCCGAATGTCACGTTCGACTTTCTCGGGTATCAGTTCCGGCCGC GACGGGTGGCGAACACACAGTGGGACGAGTTCTTCTGTGGCTACACGCCTGCGGTCAGTCCGACGGCGCTCAAGTCGATG CGGGCAACGATCAAAAGTTTGAACATCCCGCGGCAGACGCCGGGGACGCTGGCCGAAATAGCCAAACAGCTCAATCCACT CCTTCGGGGATGGATTGCCTACTATGGACGGTACAGTCGTTCGGCCCTGTCCACTCTGGCTGATTACGTTAATCAGAAAC TCAGGGCTTGGATCAGGCGAAAGTTCAAACGCTTTCAGTCCCATAAGACACGCGCCAGCCTCTTCTTGCGAAAGCTGGCG CGGGAAAATCCGGGGCTGTTCGTGCATTGGAAGGCGTTCGGAACGAACACGTTTACCTGA Protein sequence : MTSESTTDKPFRIEKRRVYEAYKAVKANRGAAGVDGQTLEIFEKDLAANLYKIWNRMSSGTYFPPPVRAVSIPKKAGGER VLGVPTVSDRIAQMVVKQMIEPDLDSLFLPDSYGYRPGKSALDAVGVTRQRCWKYDWVLEFDIKGLFDNLPHDLLLKAVR KDVKCNWALLYIERWLTAPMEKNGEVIERSRGTPQGGVVSPILANLFLHYAFDLWMTRTHPDLPWCRYADDGLVHCQSEQ QAEALKVELSSRLAACGLQMHPTKTKIVYCKDQRRREAYPNVTFDFLGYQFRPRRVANTQWDEFFCGYTPAVSPTALKSM RATIKSLNIPRQTPGTLAEIAKQLNPLLRGWIAYYGRYSRSALSTLADYVNQKLRAWIRRKFKRFQSHKTRASLFLRKLA RENPGLFVHWKAFGTNTFT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13526.1 | reverse transcriptase | Not tested | PAGI-7 | Protein | 5e-118 | 55 |
| unnamed | CAD33771.1 | putative reverse transcriptase | Not tested | PAI I 536 | Protein | 2e-86 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SM_b20780 | NP_438012.1 | reverse transcriptasematurase of intron RmInt1 protein | VFG1512 | Protein | 1e-86 | 47 |
