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Name : SM_b20979 (SM_b20979) Accession : NP_437644.1 Strain : Genome accession: NC_003078 Putative virulence/resistance : Virulence Product : large C4-dicarboxylate uptake permease, DedA family protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 1211593 - 1212906 bp Length : 1314 bp Strand : - Note : - DNA sequence : ATGACCCTATTCCATCTGGCCGGCCCCTCGCTTCTCGTCGTCGTCCTGTTTCTGCTGTCGACGCCGATCACCTGGGCCAT GGCGATCGGAGCGTTCGCCTTCTTCCTCATCAATATGGACATGATCCCGCTCGCCAATTTCGCGCAGGAAATGGCTGAAG GCAGTCAATCCGTGTCCTTGTTGGCGCTGCCGCTGTTCGTTCTTGCCGGCTGCATCATGAACGCCTCGGGCATCACGCGG CGTCTATTGGCGCTTGCGGACGTGCTCGTCGGCCACATGACGGGCGCGCTGGCGCAGATGTGCACCGTGCTCGGCACCTT GCTCGGCGGACTTACCGCATCTGCCAATGCCGATGCGGCGATGCTCGCCAAAACGCTCGGCGTCGAGATGTCGCAACGGG GCTACAGCCGGGCCTTCGCCGCGGTCATCACATCGTCGGCGGCCATCATCACGAGCCTCATTCCGCCGTCGATCGGCCTT ATCGTCTATGGTTTTCTGGCGGAGACGTCCATCGGCCGGCTCTTCGCAGCGGGTGTCATACCTGGCCTCGTGCTGGCGAC CGGGCTCATGGTCACCACCTATTTCATCGCCCGCAAGCGTGGTTACAAGCCGTTGCGCAAGGAGCGTGCCACCCGCGCAG AGGGCGTCCGGGCGCTGATCGACGGGCTCTGGGCGCTGTCGATCCCGGTGGTGATCTTCGCCGGTACGCGATACGGTCTT TTCACCACCACCGAAGCCGGTGCGGTGGTGGTCGTCTACGTGCTCTTCGTCGCCGTGTTCGGCTACCGCGAATTCACCTT CCGCCAGATCCCGGAGGTTCTTGCCGAGGCCGTGCGCGATTCGGCCGTGGTCATGATCATGATCTGCGCGGCGGCAGCCT TCGGTTTCTATCTCGCCTGGGAGCAGGTGCCGCAGGCCATGTCCGGCTGGCTCGGCGAAGCCACCGACAATCCGCTCCTG ATGCTGCTCCTCATCAACGTCCTGCTGATCGTCATCGGCACGGCGATCGAGGGGTCGGCGGCGCTGATCATCCTGACGCC GATGCTGATCCCGATCATCGACGGCGTGGGCATCGATCGCGTGCATTTCGGCGTCGTCTTCATCACGAACCTGACCATCG CCGGCATCACGCCGCCGGTCGGGGGATTGATGTACATCTCGTCCATGGTGCTGAAAGTGCCGATGATGGCCTATGCCCGC GAGGTGCTGCCTTACCTGGCGATGATGATGGTCATTCTCGTCATGCTGAGCATGTTCCCGCAGCTGTCGCTTTGGCTGCC GAACCTGGTCTATGGGACGACGGCGGTCCAATAG Protein sequence : MTLFHLAGPSLLVVVLFLLSTPITWAMAIGAFAFFLINMDMIPLANFAQEMAEGSQSVSLLALPLFVLAGCIMNASGITR RLLALADVLVGHMTGALAQMCTVLGTLLGGLTASANADAAMLAKTLGVEMSQRGYSRAFAAVITSSAAIITSLIPPSIGL IVYGFLAETSIGRLFAAGVIPGLVLATGLMVTTYFIARKRGYKPLRKERATRAEGVRALIDGLWALSIPVVIFAGTRYGL FTTTEAGAVVVVYVLFVAVFGYREFTFRQIPEVLAEAVRDSAVVMIMICAAAAFGFYLAWEQVPQAMSGWLGEATDNPLL MLLLINVLLIVIGTAIEGSAALIILTPMLIPIIDGVGIDRVHFGVVFITNLTIAGITPPVGGLMYISSMVLKVPMMAYAR EVLPYLAMMMVILVMLSMFPQLSLWLPNLVYGTTAVQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 3e-40 | 42 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 2e-40 | 42 |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 3e-40 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SM_b20979 | NP_437644.1 | large C4-dicarboxylate uptake permease, DedA family protein | VFG1110 | Protein | 1e-40 | 42 |
