Gene Information

Name : Atu5505 (Atu5505)
Accession : NP_396439.1
Strain :
Genome accession: NC_003064
Putative virulence/resistance : Virulence
Product : two component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 496294 - 496959 bp
Length : 666 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCGTTCTTGTCGCTGAAGATGACAAACGTATAGCTCAGTCCCTTTCCGTCGCACTCGCGGCGGCCGGTTTCGTGAC
AGAGCTATCGGCAAACGGTGAGGACGCCTGGTTTAGGGGAGAAACGGAGGCATTCGATGCCGTTATTCTGGATCTCGGCC
TTCCTGGCCTGGATGGATTGACCATTCTCAAGCGGTGGCGCCGCGACGGGCGCGCTACTCCAGTTCTCATCCTCACAGCC
CGTGGAGACTGGAGTGAACGGGTCGAAGGTATCGAATCCGGTGCGGATGACTACGTCGTGAAGCCGTTCAGGATGGAGGA
AGTTGTAGCGCGTGTTCGGGCGCTGGTGAGGCGCGCTGCCGGGTTTTCTTCGCCGATTATTACAATAGGTCAATACACCT
TGGACACACGTCTGAAACAGGTCTCCATGGGAGGATTGCCCGTTGCGCTCTCTCCGCAGGAGTATCGCCTTCTGGCCTTC
ATGGCGCACAGGCCGGGTAAGGTCGTCTCCCAGTTGGAAATTACCGAACATCTTTATGCCCAGGATGACGATCGTCTGTC
CAACGCTGTCGAGGTGCTGGTTGGTCGGCTTCGTCGCCGACTGGGTGCCGATATCATCATTACGCGAAGGGGGTTGGGAT
ATCTCCTGGGTGGCCATGCCGCATGA

Protein sequence : 
MRVLVAEDDKRIAQSLSVALAAAGFVTELSANGEDAWFRGETEAFDAVILDLGLPGLDGLTILKRWRRDGRATPVLILTA
RGDWSERVEGIESGADDYVVKPFRMEEVVARVRALVRRAAGFSSPIITIGQYTLDTRLKQVSMGGLPVALSPQEYRLLAF
MAHRPGKVVSQLEITEHLYAQDDDRLSNAVEVLVGRLRRRLGADIIITRRGLGYLLGGHAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 7e-14 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Atu5505 NP_396439.1 two component response regulator BAC0487 Protein 2e-18 42
Atu5505 NP_396439.1 two component response regulator NC_002516.2.879194.p Protein 6e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Atu5505 NP_396439.1 two component response regulator VFG1386 Protein 2e-15 41