Gene Information

Name : fepC (Atu5316)
Accession : NP_396249.1
Strain :
Genome accession: NC_003064
Putative virulence/resistance : Virulence
Product : ABC transporter nucleotide binding/ATPase (iron-siderophore)
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 310800 - 311645 bp
Length : 846 bp
Strand : +
Note : -

DNA sequence : 
ATGACAGACCGGCCGGATACCCGAATCGAAAGGCTTGAGGTTCAAAATGCGACGTTGCGCTATAACCAGCGGATCATCGC
TGAGGATTTGTCTGTGAAGATTCCAGACGGTTCCTTTACCGTTATCGTTGGACCCAATGCCTGCGGTAAGTCCACATTGC
TGCGTGCCCTGTCGCGGCTGCTGACGCCTTCAGCAGGAGAGGTTATTCTCGACGGCAAGGCGATCGCCGGCTATCCCGCC
AAACAGCTTGCCCGCGCGATTGGCCTTTTGCCACAGAGCTCGATCGCCCCCGACGGCATCACCGTCGCTGAGCTCGTCGC
TCGCGGCCGCTATCCCCATCAATCCCTCTTCCGGCAATGGTCGAGCGAAGACGAAGCGGCAGTCGCATTGGCAATGGCTG
CGACGCAGACGACGCAGCTTTCCACTCGTCTTGTCGACGAGCTTTCCGGCGGCCAGCGGCAGAGAGTGTGGGTTGCCATG
GTGCTGGCACAGGAAACACCGATCCTGCTCCTTGATGAGCCAACCACTTTCTTGGATATCGCCCATCAGATTGACCTGCT
TGATCTTTGTCAGGAGCTTAACGCTGCAGGCCGCACGATCGTCGCGGTGCTGCACGATCTCAACCATGCTTGCCGCTATG
CCACCAATATCATCGCCATGAGGGATGGCGCCATCATCGCACACGGCTCTCCACCCACCACCGTAACCGAACGGCTGGTC
GAAGACGTCTTTGGCCTCCCCTGCATGATCATTCCCGATCCGGTCTCAGGCACACCGTTGATCGTCCCAAAAGTTAAGGT
AAGAGCCGCCTGCATCCCAATAACGCCGGACATTCCTGAGCATTAA

Protein sequence : 
MTDRPDTRIERLEVQNATLRYNQRIIAEDLSVKIPDGSFTVIVGPNACGKSTLLRALSRLLTPSAGEVILDGKAIAGYPA
KQLARAIGLLPQSSIAPDGITVAELVARGRYPHQSLFRQWSSEDEAAVALAMAATQTTQLSTRLVDELSGGQRQRVWVAM
VLAQETPILLLDEPTTFLDIAHQIDLLDLCQELNAAGRTIVAVLHDLNHACRYATNIIAMRDGAIIAHGSPPTTVTERLV
EDVFGLPCMIIPDPVSGTPLIVPKVKVRAACIPITPDIPEH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-54 53
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-54 50
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-54 50
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-54 50
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-54 50
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-43 49
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-54 49
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-54 49
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-48 47
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-47 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-47 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-47 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-47 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC NP_396249.1 ABC transporter nucleotide binding/ATPase (iron-siderophore) BAC0164 Protein 1e-43 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepC NP_396249.1 ABC transporter nucleotide binding/ATPase (iron-siderophore) VFG0925 Protein 4e-66 62
fepC NP_396249.1 ABC transporter nucleotide binding/ATPase (iron-siderophore) VFG1042 Protein 1e-43 49