Gene Information

Name : Atu5028 (Atu5028)
Accession : NP_395963.1
Strain :
Genome accession: NC_003064
Putative virulence/resistance : Unknown
Product : IS426 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 29376 - 29753 bp
Length : 378 bp
Strand : -
Note : -

DNA sequence :
ATGTCTAACGAGTATCGACACGTTGAATTGCTGACGGGTGATGTTCGCCCCAGGCGGTGGACAACCGAGCAAAAGCTGAC
AATCATTGAGCAGAGTTTCTTACCCGGCGAGACGGTATCTTCGACCGCTCGCCGTCATGGCGTCGCGCCCAATTTGCTTT
ATCGGTGGCGCAGGCTCTTGAGCGAGGGAGGTGCTGCAGCCGTGGATTCTGACGAGCCGGTTGTCGGGAATTCGGAAGTG
AAGAAACTGGAGGATCGCGTCCGGGAGTTGGAGCGCATGCTCAGTCGCAAGACGATGGAGGTCGAATCCTCCGCGAAGCC
CTTACCAAAAAAACGGATATCGCGGCCGATCTTGTTGCCGAAGGACGGTTCGCGATGA

Protein sequence :
MSNEYRHVELLTGDVRPRRWTTEQKLTIIEQSFLPGETVSSTARRHGVAPNLLYRWRRLLSEGGAAAVDSDEPVVGNSEV
KKLEDRVRELERMLSRKTMEVESSAKPLPKKRISRPILLPKDGSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpG AAD44740.1 TnpG Not tested SHI-2 Protein 5e-17 43
unnamed AAL57520.1 IS2 transposase Not tested LEE Protein 5e-17 43
st02 CAC81840.1 ST02 protein Not tested LEE II Protein 5e-17 43
ECO26_5247 YP_003232129.1 insertion sequence 2 OrfA protein Not tested LEE Protein 6e-17 43
S3188 NP_838471.2 insertion sequence 2 OrfA protein Not tested SHI-1 Protein 6e-17 43
S4060 NP_839229.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 6e-17 43
unnamed AAL67376.1 insertion sequence protein Not tested PAI II CFT073 Protein 2e-14 43
S4049 NP_839217.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 2e-16 42
aec50 AAW51733.1 Aec50 Not tested AGI-3 Protein 6e-17 42
SF2984 NP_708758.3 IS2 ORF1 Not tested SHI-1 Protein 8e-17 42
insC YP_002414034.1 IS2 insertion element repressor InsA; KpLE2 phage-like element Not tested Not named Protein 4e-14 42
insC YP_854262.1 IS2 transposase Not tested PAI I APEC-O1 Protein 6e-12 41
c5196 NP_757044.1 transposase insC Not tested PAI II CFT073 Protein 6e-12 41
insC AAZ04431.1 IS2 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 4e-12 41
SF3722 NP_709461.3 IS2 ORF1 Not tested SHI-2 Protein 2e-16 41
SF3709 NP_709448.3 IS2 ORF1 Not tested SHI-2 Protein 2e-16 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Atu5028 NP_395963.1 IS426 transposase VFG0648 Protein 2e-17 42
Atu5028 NP_395963.1 IS426 transposase VFG1733 Protein 1e-14 42
Atu5028 NP_395963.1 IS426 transposase VFG0609 Protein 7e-17 41
Atu5028 NP_395963.1 IS426 transposase VFG0622 Protein 7e-17 41