Gene Information

Name : avhB11 (Atu5172)
Accession : NP_396102.1
Strain :
Genome accession: NC_003064
Putative virulence/resistance : Virulence
Product : type IV secretion protein AvhB11
Function : -
COG functional category : N : Cell motility
COG ID : COG0630
EC number : -
Position : 169100 - 170110 bp
Length : 1011 bp
Strand : +
Note : -

DNA sequence : 
ATGTCAGAGAGGCAAGAATCGGCTGTCGTCAGCGAGCTGTTGAAGCCGTTTTCGACATTCCTTCAGGACAAGTCTCTCCT
AGAGGTGATTGTCAATCGGCCCGGGCAGGTGTTGACGGAAGGTCCCGGTGGGTGGCGGACCTATGAAATGCCGGAGCTGA
CCTTCGAAAAGCTCATGCGTCTTGCCCGGGCAGTCGCAAGTTTTTCCCATCAGTCGATTGATGAGACGCGTCCAATATTG
TCGGCGACGCTACCCGGGAACGAACGAATCCAGATCGTCATCCCCCCGGCGACCATCAATGACACTGTCAGCATGACAAT
CCGCAAGCCTTCTTCGGTCGACTTCAGTCTTGATGATCTGGAGGAAAAGGGATTTTTCCAGACAGCGTGCGCAGCGACCA
GTACCTCCTCCTCCGCGCAGGATGAGGAACTGTGTGAAACATATCGTGCCGGCCGTTTTAAGGATTTCCTGCGGCAGGCC
GTCATCGCTCGAAAAAACATCATCATTTCTGGCGCCACAGGTTCGGCGAAAACGACACTTTCCAAAGCATTGATCAAGCA
TATTCCCGAAAACGAGAGGGTCATTTCAATCGAGGACACTCCCGAGCTCGTTATCTCACAACCGAACCACGTGCGCTTGT
TCTACTCGAAAGGACGGCAGGGGCTTTCGCGTGCCGGACCGAAAGAGCTTCTCGAATCCTGTCTTCGTATGCGGCCGGAT
AGGATTCTGCTTCAGGAGCTTCGCGATGGGACGGCCTTTTATTATATCCGGAACGTGAATTCAGGCCATCCTGGCTCAAT
AACCACGGTCCATGCGAACTCGGCCGAATTGGCTTTTGAGCAGCTGGTCCTCCTCGTCAAGGAATCGGAGGGCGTTGCAG
GCTTGGATCGGGCCGACATCGTGGCTTTGTTGAAGGCGAGTATCGATATCGTCGCCCAGTGCAGGAGAAACAAAGGAAAC
TTTCGGCTGTCTGAGGTTTATTTCAGGTGTGAGCGTAAAGCCAAGGACTAG

Protein sequence : 
MSERQESAVVSELLKPFSTFLQDKSLLEVIVNRPGQVLTEGPGGWRTYEMPELTFEKLMRLARAVASFSHQSIDETRPIL
SATLPGNERIQIVIPPATINDTVSMTIRKPSSVDFSLDDLEEKGFFQTACAATSTSSSAQDEELCETYRAGRFKDFLRQA
VIARKNIIISGATGSAKTTLSKALIKHIPENERVISIEDTPELVISQPNHVRLFYSKGRQGLSRAGPKELLESCLRMRPD
RILLQELRDGTAFYYIRNVNSGHPGSITTVHANSAELAFEQLVLLVKESEGVAGLDRADIVALLKASIDIVAQCRRNKGN
FRLSEVYFRCERKAKD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB11 YP_001610007.1 VirB11 protein Virulence Not named Protein 3e-91 59
vblB11 YP_001610351.1 VblB11 protein Virulence Not named Protein 4e-88 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
avhB11 NP_396102.1 type IV secretion protein AvhB11 VFG2240 Protein 6e-91 60
avhB11 NP_396102.1 type IV secretion protein AvhB11 VFG2218 Protein 5e-54 46
avhB11 NP_396102.1 type IV secretion protein AvhB11 VFG0024 Protein 2e-46 41