Gene Information

Name : avhB9 (Atu5170)
Accession : NP_396100.2
Strain :
Genome accession: NC_003064
Putative virulence/resistance : Virulence
Product : type IV secretion protein AvhB9
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3504
EC number : -
Position : 167053 - 167904 bp
Length : 852 bp
Strand : +
Note : -

DNA sequence :
ATGCGCATCCCTCGAATTCCTGCACTCATCGTGACCCTTTCGATGTCGCCGGCGTTTGCGCTTGAGATACCCCGAGGTGC
CTCGCAAGACAGTCGTATCCGGTTCGTGAACTACCAACCCTACAACATCACGCGGGTGGTCGGCACTCTGCGGTCATCCG
TACAGGTCGAGTTCGCGGCGGACGAGGAAATCGCCCATGTCGCGCTCGGCAATAGCGTCGCCTGGGAAGTTGCGCCGGCC
GGCAACATCCTGTTCCTGAAGCCACGCGAGAGCCAGCCGGTGACGAATATTTCCGTGGTTACGACGCGCAGGGATGGCTC
GACCCGCAGCTACCAGATGGAACTGACGGCGCGCGATGGCTCCGTGGAGGCTGGTCAAAACACCTACTTCTACGTGAAGT
ACAGGTATCCAGGCGATGACGCCGAGCTTCGCCGCCAGCAGGCAGCGTCGAGGGCTCTCGCGGCCCAGGCGAAGGACGCC
GACAATGTGCTGGCGCTTCACGAAGCCTATGGCCCCCGAAACTGGCGCTATTCTTCTCAGGGATCGCAGGCACTGGAGCC
GCAAAGCGTCTACGACAACGGCAAGATTACAACGTTCGCCTTTGTGGGTAACCAGGAAATGCCCGCGATCTATATGGAGA
ACTCCGATGGCTCCGAAAGCCTTGTTCCGAAGTCGGTCGATGGAGATCTGGTGATGGTGCACGCGATCAGCCGCAAGTTC
ATCTTGCGTCGGGGCAAGGATGTGCTCTGCGTCTTCAACGAAGCCTACGACCGCGTCGGTATCAATCCTGACACCAACAC
AACGTCTCCTTCGGTGGAGCGCGTCGTGAAGCGCGACGTTACCGGGCAATAG

Protein sequence :
MRIPRIPALIVTLSMSPAFALEIPRGASQDSRIRFVNYQPYNITRVVGTLRSSVQVEFAADEEIAHVALGNSVAWEVAPA
GNILFLKPRESQPVTNISVVTTRRDGSTRSYQMELTARDGSVEAGQNTYFYVKYRYPGDDAELRRQQAASRALAAQAKDA
DNVLALHEAYGPRNWRYSSQGSQALEPQSVYDNGKITTFAFVGNQEMPAIYMENSDGSESLVPKSVDGDLVMVHAISRKF
ILRRGKDVLCVFNEAYDRVGINPDTNTTSPSVERVVKRDVTGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vblB9 YP_001610349.1 VblB9 protein Virulence Not named Protein 8e-77 64
virB9 YP_001610005.1 VirB9 protein precursor Virulence Not named Protein 8e-73 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
avhB9 NP_396100.2 type IV secretion protein AvhB9 VFG2238 Protein 4e-73 56