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Name : avhB4 (Atu5165) Accession : NP_396095.2 Strain : Genome accession: NC_003064 Putative virulence/resistance : Virulence Product : type IV secretion protein AvhB4 Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3451 EC number : - Position : 161935 - 164208 bp Length : 2274 bp Strand : + Note : - DNA sequence : ATGGTCATGGTCGCGCTCGCAGGCGTATCTTTCGAAACTGCTGATCTGCTCGACATCAACGCGCTCCATCGCGATCTCAA CACGCTCTATCGAAATATAGCCGATGAGCGGCTCGCGATCTGGACCCATCTCATTCGGCGCAGGGATAGTGACTATCCGG GCGGAACGTTTGCAACGCCATTCTCCGCCTCGCTCAACGAGAAATACCGGGAACGCATGGCACGCGAACACCTTTTCCGC AACGATCTCTATCTGACCGTCCTTTGGTCGCCAGCGCGTAGCCCTGCGGACAAGGCGGGGAAGCTGCTGTCGTACCTTCG ACGGTCAAAACGACTCGATACGGAGCTGGATGAAGAGGCTCTGAAAGAGCTTAAGGATAAAGTCGTCATTGTAATGGCGG GCTTGAGGAGCTTTGAGCCACGGCTCCTTTCTCTTTATGAACAGGAAGGCATGCTCTTCTCTGAACCGAGCGAGGTGCTG CACCAGCTCGTCGGCGGGAGGCGTGAGCGCGTGCCGCTTACCGAAGGTCGCGTCGCGTCGGCAATTTACTCTGATCGCGT CATCATAGGTCGGGAAACGATCGAGATCCGGCATGAGGCAGAAAGCCGCTTCGCCGGCATGCTGAGCTTCAAGGAATATC CAGCCCGTACCAGGACAGGCATGCTGGACGGAGTTCTAAACAGTCCGTTTGAACTCATTCTCTCACAGTCGTTCTGCTTT GTGTCGAAGGCGGACGCTCGCGTCATCATGGGGCGTAAGCAAAACCAGTTGGTGAGCAGCGGCGACAAGGCGGCTTCGCA GATCGATGAACTTGACGATGCGATGGACGACCTGGAGTCCAACCGCTTCGTGCTCGGTGAGCATCACCTGACACTCTCCG TCTTTGCGACCACTTTAAAGGAATTAACCGACAATCTGGCAAAGGTTCGCGCCAGCCTGACCAATGGCGGGGCTGTCGTT GCGCGCGAGGATCTTGGTCTCGAAGCGGCATGGTGGGCGCAACTTCCGGGCAATTTTCGTTACCGCGCGCGCTCAGGCGC GATCAGCTCGAAGAATTTCGCAGCATTGTCACCGTTCCATTCCTATCCGATCGGACAGAAGGACGGCAATGAGTGGGGAC CCGCCGTCGCCCTGCTCAAGACCGCTTCAGGCTCGCCCTACTACTTCAATCTCCATTATGGCGATCTGGGCAACACCTTC ATGTGCGGTCCGTCGGGAGCGGGCAAAACCGTGATTGTCAATTTCATGCTGTCACAGCTCGAGAAACACGACCCGCACGT GGTGTTCTTCGACAAGGATCGCGGCGCGGACCTTTATGTTCGCGCCGCCGGAGGCACCTACCTGCCGCTGAAGAACGGGG TCCCCACCGGCTGCGCTCCCTTAAAGGCCCTCAACCTGACGCCGGAGAACAAGGTGTTCCTGGCGCGCTGGATCGGCAAG CTTGTGGGTTCAGGGGCGCGGGAACTGACTGTCACCGAACTTCGCGACATCTCCGGCGCGATCGACGGCCTTGCCGACCT GCCCGCTGAGCGACGGACAATAGGGGCGCTGCGGGCTTTCCTCAACAATACGGATCCGGAAGGTATCGCGGCGAGGCTCC GCCGGTGGGAAGAGGGAGGGCCGCTCGGCTGGGTCTTCGACAATGTCATCGAAGATATCGGATTTGGCGATTTCGGCGGA TCAGGGAAGTTCATCGGCTACGACATGACCGACTTCCTCGACAACGAGGAAATTCGCATACCGCTGATGGCCTATCTCTT CCATCGCGTCGAGCAGGTGATCGATGGCCGCCGGATCATCATCGTCATCGACGAATTCTGGAAGGCGCTACAGGACGAGG GGTTCCGCGATCTTGCGCAAAACAAGCTGAAGACCATCCGCAAACAAAATGGGTTGATGCTGTTTGCCACGCAAAGCCCG CGCGACGCGCTGAACTCGCCAATCGCGCACACGATCATCGAGCAATGCCCGACACAGATCTTCCTGCCCAACTCGCGCGG CAACCATGCCGACTATGTCGATGGATTCAAGCTCACCGAGCGCGAATACGAATTGATAGCGCGCGAGCTTTCCGTTGAAA GCCGGAGGTTCGTGTTGAAGCAAGGACACAACAGCGTCGTTGCCGAGCTCGATCTCAACGGCTTCGATGACGAGCTCGCC ATCCTCTCCGGCCGGACCGCCAATGTCGAACTTCTCGACGCGATCCGCGCGGAGGTTGGAGACGACGTCGAGAACTGGCT TCCCATTTTCCAACAGCGAAGGAGTGCTAGCTGA Protein sequence : MVMVALAGVSFETADLLDINALHRDLNTLYRNIADERLAIWTHLIRRRDSDYPGGTFATPFSASLNEKYRERMAREHLFR NDLYLTVLWSPARSPADKAGKLLSYLRRSKRLDTELDEEALKELKDKVVIVMAGLRSFEPRLLSLYEQEGMLFSEPSEVL HQLVGGRRERVPLTEGRVASAIYSDRVIIGRETIEIRHEAESRFAGMLSFKEYPARTRTGMLDGVLNSPFELILSQSFCF VSKADARVIMGRKQNQLVSSGDKAASQIDELDDAMDDLESNRFVLGEHHLTLSVFATTLKELTDNLAKVRASLTNGGAVV AREDLGLEAAWWAQLPGNFRYRARSGAISSKNFAALSPFHSYPIGQKDGNEWGPAVALLKTASGSPYYFNLHYGDLGNTF MCGPSGAGKTVIVNFMLSQLEKHDPHVVFFDKDRGADLYVRAAGGTYLPLKNGVPTGCAPLKALNLTPENKVFLARWIGK LVGSGARELTVTELRDISGAIDGLADLPAERRTIGALRAFLNNTDPEGIAARLRRWEEGGPLGWVFDNVIEDIGFGDFGG SGKFIGYDMTDFLDNEEIRIPLMAYLFHRVEQVIDGRRIIIVIDEFWKALQDEGFRDLAQNKLKTIRKQNGLMLFATQSP RDALNSPIAHTIIEQCPTQIFLPNSRGNHADYVDGFKLTEREYELIARELSVESRRFVLKQGHNSVVAELDLNGFDDELA ILSGRTANVELLDAIRAEVGDDVENWLPIFQQRRSAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB4 | YP_001610000.1 | VirB4 protein | Virulence | Not named | Protein | 0.0 | 63 |
| trwK | YP_001610476.1 | TrwK protein | Virulence | Not named | Protein | 1e-120 | 41 |
| trwK | CAD42844.1 | TrwK protein | Not tested | trw-PAI | Protein | 9e-121 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| avhB4 | NP_396095.2 | type IV secretion protein AvhB4 | VFG2233 | Protein | 0.0 | 63 |
