Gene Information

Name : istB (Atu4861)
Accession : NP_355801.1
Strain :
Genome accession: NC_003063
Putative virulence/resistance : Unknown
Product : IS21 family transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 2046717 - 2047475 bp
Length : 759 bp
Strand : -
Note : -

DNA sequence :
ATGAGTGACGAAGTGCCCGAGATCCTGCTCGCCCATTATCTCAAGACCCTGAAGCTCCCGACCTTCCAGCGCGAGTACCA
GAAGCTGGCCCGGCTATGTGCCACCGAGGGCGTCGATCATGTCGAATACCTGTTGCGGCTTTCCGAAAGAGAGATGATCG
AACGGGACCGCCGCAAGGTCGAGCGCCGCATCAAGGCGGCACGGTTCCCAGTCGTCAAAAGCCTGGACAGCTTCGACTTC
GCCGCCATCCCCAAACTCAATAAGATGCAGGTGCTCGAGCTGGCACGCTGCGAATGGATCGAGCGTCGTGAGAACGTCAT
TGCGCTCGGGCCCAGTGGCACGGGAAAGACGCATGTCGCGCTCGGCCTCGGCCTGGCCGCATGCCAGAAGGGCTTGTCCG
TCGGCTTCACCACGGCCGCCGCTCTGGTCAGCGAGATGATGGAAGCCCGTGACGAACGGCGTCTGCTCCGCTTCCAGAAG
CAAATGGCTGCCTACCAGCTTCTCATCATTGATGAGTTGGGCTTTGTGCCGCTGTCCAAGACTGGTGCGGAATTGCTGTT
CGAGCTGATCTCACAACGCTATGAACGCGGCGCGACCCTGATCACCAGCAATCTTCCGTTTGACGAATGGACAGAGACCT
TGGGATCGGAACGACTGACTGGTGCACTGCTCGATCGCATCACCCACCACGTCAACATTCTCGAGATGAACGGCGACAGC
TATCGTCTCGCCCAAAGCCGCGCACGAAAGGCAGGCTGA

Protein sequence :
MSDEVPEILLAHYLKTLKLPTFQREYQKLARLCATEGVDHVEYLLRLSEREMIERDRRKVERRIKAARFPVVKSLDSFDF
AAIPKLNKMQVLELARCEWIERRENVIALGPSGTGKTHVALGLGLAACQKGLSVGFTTAAALVSEMMEARDERRLLRFQK
QMAAYQLLIIDELGFVPLSKTGAELLFELISQRYERGATLITSNLPFDEWTETLGSERLTGALLDRITHHVNILEMNGDS
YRLAQSRARKAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 1e-36 42
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 1e-36 42
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 1e-36 42
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 1e-36 42
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 2e-36 42
api84 CAF28558.1 putative transposase Not tested YAPI Protein 1e-36 42
unnamed CAA21402.1 - Not tested HPI Protein 2e-36 42
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 1e-36 42
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 3e-36 42
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 2e-36 42
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 2e-36 42
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 1e-36 42
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 1e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
istB NP_355801.1 IS21 family transposase VFG1515 Protein 7e-37 42
istB NP_355801.1 IS21 family transposase VFG1627 Protein 7e-37 42
istB NP_355801.1 IS21 family transposase VFG1606 Protein 7e-37 42
istB NP_355801.1 IS21 family transposase VFG1663 Protein 2e-36 42
istB NP_355801.1 IS21 family transposase VFG1460 Protein 7e-33 41