|
Name : cat (Atu4738) Accession : NP_355927.1 Strain : Genome accession: NC_003063 Putative virulence/resistance : Resistance Product : chloramphenicol acetyltransferase Function : - COG functional category : R : General function prediction only COG ID : COG0110 EC number : - Position : 1905632 - 1906261 bp Length : 630 bp Strand : + Note : - DNA sequence : ATGGAAAACTATTTCGAAAGCCCATTCCGGGGCATTACACTCGACAAGCAGGTGAAGAGCCCGAACCTGGTGGTCGGAAA ATACAGCTATTATTCCGGCTATTACCACGGCCACAGTTTCGAGGATTGCGCCCGGTACCTGCTGCCCGATGAGGGCGCGG ACAGGCTGGTGATCGGAAGCTTCTGCTCGATCGGTTCGGGCGCCGCCTTCATCATGGCGGGCAATCAGGGGCACCGCAAC GAATGGATCAGTACCTTCCCGTTCTTCTTCATGCCGGAGGTGCCGGAATTCGAGAATGCCGCCAACGGTTATCTGCCGGC GGGCGACACCGTCATCGGCAACGATGTCTGGATCGGTTCGGAAGCGATCATCATGCCCGGCATCACCGTCGGTGATGGCG CGGTGATCGGAACGCGGGCGCTGGTGACGAAGGACGTCGAGCCCTACGCCATCGTCGGCGGCAACCCCGCAAAAACGATC CGCAAGCGGTTTGACGACGATAGCATCGCCCTGCTGCTCGAGATGAAATGGTGGGGCTGGCCGGCGGAGCGGCTGAAAGC TGCAATGCCGCTGATGACCAGCGGCAATGTCGCGGCGCTCTATCGTTTCTGGCGGTCCGATAGCCTCTAG Protein sequence : MENYFESPFRGITLDKQVKSPNLVVGKYSYYSGYYHGHSFEDCARYLLPDEGADRLVIGSFCSIGSGAAFIMAGNQGHRN EWISTFPFFFMPEVPEFENAANGYLPAGDTVIGNDVWIGSEAIIMPGITVGDGAVIGTRALVTKDVEPYAIVGGNPAKTI RKRFDDDSIALLLEMKWWGWPAERLKAAMPLMTSGNVAALYRFWRSDSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| catB8 | YP_005797132.1 | chloramphenicol acetyltransferase | Not tested | AbaR4e | Protein | 2e-58 | 69 |
| catB3 | AET25385.1 | chloramphenicol acetyltransferase | Not tested | PAGI-2(C) | Protein | 6e-57 | 68 |
| catB3 | AFG30108.1 | chloramphenicol acetyltransferase | Not tested | PAGI-2 | Protein | 6e-57 | 68 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cat | NP_355927.1 | chloramphenicol acetyltransferase | NC_002516.2.878374.p | Protein | 9e-58 | 72 |
| cat | NP_355927.1 | chloramphenicol acetyltransferase | AY123251.gene2.p01 | Protein | 8e-59 | 69 |
| cat | NP_355927.1 | chloramphenicol acetyltransferase | AY740681.1.gene5.p01 | Protein | 3e-57 | 68 |
| cat | NP_355927.1 | chloramphenicol acetyltransferase | AF322577.2.gene4.p01 | Protein | 3e-57 | 68 |
| cat | NP_355927.1 | chloramphenicol acetyltransferase | JF268688.1.gene6.p01 | Protein | 2e-53 | 65 |
| cat | NP_355927.1 | chloramphenicol acetyltransferase | AM180355.1.gene2499. | Protein | 2e-29 | 47 |
| cat | NP_355927.1 | chloramphenicol acetyltransferase | CP001581.1.gene990.p | Protein | 2e-37 | 45 |
| cat | NP_355927.1 | chloramphenicol acetyltransferase | NC_011595.7057349.p0 | Protein | 5e-24 | 42 |
| cat | NP_355927.1 | chloramphenicol acetyltransferase | NC_010410.6000796.p0 | Protein | 5e-24 | 42 |
