Gene Information

Name : sitA (Atu4471)
Accession : NP_356186.2
Strain :
Genome accession: NC_003063
Putative virulence/resistance : Virulence
Product : ABC transporter substrate-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 1612488 - 1613387 bp
Length : 900 bp
Strand : -
Note : -

DNA sequence : 
GTGACAGACGTGAATCTCCATAAAATCCGCCATGCCCTATTTGCTTTTTCGCTTTTCCTGCCGGGTGTTGCCGTCGCGCA
GGAAAAGCCGAAGGTGGTCACCACCTTCACCATCATCGCCGATATGGCGCGCAACGTGGCGGGTGATGCGGCGGATGTGG
AGAGCATCACCAAGCCGGGTGCGGAAATTCACAATTACCAGCCGACACCGCGTGATATTCTCAAAGCCCGCAAGGCCGAT
CTGGTGCTGCGCAATGGCCTCAATCTGGAATTGTGGTTCGAGAAATTCCTGGCCAATCTTTCCGGCGTGCCTGATGTGAC
GGTGAGCGATGGTGTGCAACCCATGGCGATCAGCGGCGGCGCCTATCAGGGGAAACCCAATCCGCATGCCTGGATGTCGC
CCGATAACGCCTTGATCTATGTGGAAAATATCCGCAAGGGCCTTGCGGAAATCGACCCTGCCCATGCCGATGTCTATACC
GCCAATGCCAAGGCCTATTCGGACAAGATCAAGGCCACGGTGCAGCCGATCCGCGATGCGCTTTCCGTTCTGCCTGACAA
CAAGCGCTGGTTGGTAACGAGCGAAGGCGCCTTTTCTTATCTCGCCCGTGATTTCGGCCTGAAGGAACTGTTCCTGTGGC
CGGTCAATGCCGATAGCCAGGGCACGCCGCAACAGGTTCGCGGCGTGATCGACGCCATGCGCGAACACAATATCCAGGTC
ATCTTCAGCGAAAGCACGGTTTCCGCCGATCCCGCAAAGCAGGTGGCCAAGGAAACCGGTGCGTCCTATGGCGGCATACT
CTATGTGGATTCGCTGAGCGAGGCGGACGGCCCAGTTCCGACCTATCTGGACCTGCTGTGCGTGACCAGCGAAACCATCG
CCAAGGGACTGTCTTCATGA

Protein sequence : 
MTDVNLHKIRHALFAFSLFLPGVAVAQEKPKVVTTFTIIADMARNVAGDAADVESITKPGAEIHNYQPTPRDILKARKAD
LVLRNGLNLELWFEKFLANLSGVPDVTVSDGVQPMAISGGAYQGKPNPHAWMSPDNALIYVENIRKGLAEIDPAHADVYT
ANAKAYSDKIKATVQPIRDALSVLPDNKRWLVTSEGAFSYLARDFGLKELFLWPVNADSQGTPQQVRGVIDAMREHNIQV
IFSESTVSADPAKQVAKETGASYGGILYVDSLSEADGPVPTYLDLLCVTSETIAKGLSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 6e-91 63
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 6e-91 63
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 6e-91 63
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-91 63
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 5e-91 63

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA NP_356186.2 ABC transporter substrate-binding protein BAC0349 Protein 3e-91 63
sitA NP_356186.2 ABC transporter substrate-binding protein BAC0439 Protein 2e-90 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA NP_356186.2 ABC transporter substrate-binding protein VFG0525 Protein 3e-91 63