|
Name : Atu4256 (Atu4256) Accession : NP_356398.2 Strain : Genome accession: NC_003063 Putative virulence/resistance : Unknown Product : oligopeptide ABC transporter ATPase Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 1381036 - 1382571 bp Length : 1536 bp Strand : - Note : - DNA sequence : GTGAATGCCGTCAAGGGCATCGATATTGACGTCAAACAGGGCGAAACGCTTGCCGTCGTCGGCGAATCCGGTTCCGGCAA GAGCCAGACCATGATGGGCATCATGGGGCTGCTGGCATCAAACGGCATTATTGAAGGTTCGGCAAAATATCGTGGACACG AGCTGATCGGTCTTCCGGTCAACGAACTGAACGATATCCGGGGTGCGAAAATCACCATGATTTTTCAGGAGCCGATGACC TCGCTCGATCCTCTTTACCGGATCGGCGCGCAAATCGCCGAACCGATCATCTACCACAGGGGTGGCAGCAAAAGGCAAGC GCGCGCACGCGTTCTCGAACTCCTGAAGCTCGTTGGAATTCCTGAGCCGGAACGGCGTATAGACAGCTACCCGCATGAGC TTTCCGGCGGTCAGCGCCAGCGCGTGATGATCGCCATGGCGCTCGCGAACGAGCCGGACATTCTGATTGCCGATGAACCG ACCACTGCGCTCGACGTGACGATCCAGGCGCAGATCCTCGACCTTCTGAAGTCGTTGCAGCAACGCTTCGGCATGGCCGT CGTCCTGATCACACACGATCTTGGCGTGGTCCGCCATTTCGCCAATCGCGTCGCCGTGATGCGCCGCGGCGAGATCGTCG AGACCGGCACGACGGAAGATATCTTCGAGCGCCCGCAGGCGGACTACACCAAGATGCTTCTCGATGCGGAACCCAGCGGG CACAAACCCGCGGTCGGCAGCGAGGCACCGGTCGTTCTCTCGGGCAAGAATGTGACGATAGACTATAAAATTCCGGGTGG CTTCCTGTCGAAGTCCAGCAAGTTCCGGGCCGTCGACAGCGTCAATGTCGACCTTCACCAGGGACAGACCATCGGCATTG TCGGTGAATCCGGATCGGGCAAGTCCACGCTTGGTCGTGCGCTTCTGCGTCTCATCGTTTCGGAAGGCCGCATTTTCTTC GGCAAGACGGAGATCACCGGCCTTGACCGAAAGGCCATGCGGCCGTTGCGGCGGCATTTGCAGCTTGTGTTTCAGGATCC CTATGGCTCGCTTTCGCCAAGACAGACGGTGGGGGAGATCATCACCGAAGGCCTGTTCGTGCATGAGCAACAGCTCAGCC GGGCGGAGCGGGACAAGCGGGCAATCGAAGCACTGAAAGAAGTCGGTCTCGATCCCGCGGCCCGCAACCGCTACCCTCAC GAATTTTCAGGCGGACAACGTCAGCGTATCGCAATCGCCCGCGCAATCATCCTCAAGCCTGAGGTCGTCATCCTCGACGA ACCGACGTCTGCGCTGGACCGATCCGTCCAAGGACAGGTCATCGACCTGCTGCGTGATCTGCAGAAGGCCCATGGCCTTT CCTACATCTTCATCAGCCACGATCTTTCGGTCATCAAGGCGATTTCGGATTACGTCATCGTCATGAGAAACGGGAAGATC GTAGAGGAGGGAGAGACGGACGCCATATTCAGCAGGCCGACGGCTGAATATACCAAAACACTCATCAAATCCGCGTTTTC GGCGGAGGTGGCGTAA Protein sequence : MNAVKGIDIDVKQGETLAVVGESGSGKSQTMMGIMGLLASNGIIEGSAKYRGHELIGLPVNELNDIRGAKITMIFQEPMT SLDPLYRIGAQIAEPIIYHRGGSKRQARARVLELLKLVGIPEPERRIDSYPHELSGGQRQRVMIAMALANEPDILIADEP TTALDVTIQAQILDLLKSLQQRFGMAVVLITHDLGVVRHFANRVAVMRRGEIVETGTTEDIFERPQADYTKMLLDAEPSG HKPAVGSEAPVVLSGKNVTIDYKIPGGFLSKSSKFRAVDSVNVDLHQGQTIGIVGESGSGKSTLGRALLRLIVSEGRIFF GKTEITGLDRKAMRPLRRHLQLVFQDPYGSLSPRQTVGEIITEGLFVHEQQLSRAERDKRAIEALKEVGLDPAARNRYPH EFSGGQRQRIAIARAIILKPEVVILDEPTSALDRSVQGQVIDLLRDLQKAHGLSYIFISHDLSVIKAISDYVIVMRNGKI VEEGETDAIFSRPTAEYTKTLIKSAFSAEVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-80 | 44 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-80 | 44 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 5e-80 | 44 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-80 | 44 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-97 | 44 |
