Gene Information

Name : ragA (Atu0978)
Accession : NP_354002.1
Strain :
Genome accession: NC_003062
Putative virulence/resistance : Virulence
Product : two component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 967945 - 968703 bp
Length : 759 bp
Strand : +
Note : -

DNA sequence : 
ATGGAAAACAAGGTTCAGGAAATGTCTGTCACATCTCTTTCCGGTTGTGCGGAAAAGGGCGACGGCGCTATTGTCCCGCA
CATGAAGATTCTTGTCATTGAAGACGACCTCGAGGCTGCGGCCTATATGACCAAGGCGTTCCGCGAAGCCGGAATTGTCG
CCGACCATGCCAGCGATGGCGAGAGCGGTTTGTTCATGGGCTGCGAGAATGCCTACGACGTACTGGTGATCGACCGCATG
CTGCCGCGACGCGACGGGCTTTCGGTCATCAGCGAGCTGCGCCGCCGCGGTATCGAGACGCCGGTGCTGATCCTTTCCGC
ATTGGGCCAGGTCGATGACCGCGTGACCGGCCTGCGCGCCGGCGGCGATGATTACCTGCCGAAACCCTATGCCTTTTCCG
AACTGCTCGCCCGCATCGAGGTGCTCGGCCGCCGCAAGGGCAAGCCCGAGCAGGACATGATCTACCGCGTGGGTGATCTC
GAACTCGACCGCCTGTCGCACGATGTCCGCCGCGGCGGCAAGGAAATCCTGCTGCAGCCGCGCGAATTCCGGCTGCTGGA
ATATCTGATGAAGAATGCCGGCCAGGTGGTGACCCGCACCATGCTGCTGGAAAATGTCTGGGATTATCATTTCGACCCGC
AGACCAATGTCATCGACGTCCATGTTTCCCGCCTGCGCTCGAAGATCGAGAAGGACTTCGAGAAACCGCTCTTGAAGACC
ATTCGCGGTGCCGGTTACATGATGAAGGACGAGGGCTGA

Protein sequence : 
MENKVQEMSVTSLSGCAEKGDGAIVPHMKILVIEDDLEAAAYMTKAFREAGIVADHASDGESGLFMGCENAYDVLVIDRM
LPRRDGLSVISELRRRGIETPVLILSALGQVDDRVTGLRAGGDDYLPKPYAFSELLARIEVLGRRKGKPEQDMIYRVGDL
ELDRLSHDVRRGGKEILLQPREFRLLEYLMKNAGQVVTRTMLLENVWDYHFDPQTNVIDVHVSRLRSKIEKDFEKPLLKT
IRGAGYMMKDEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ragA NP_354002.1 two component response regulator BAC0125 Protein 3e-45 46
ragA NP_354002.1 two component response regulator BAC0083 Protein 2e-44 46
ragA NP_354002.1 two component response regulator BAC0347 Protein 1e-45 44
ragA NP_354002.1 two component response regulator BAC0111 Protein 5e-48 44
ragA NP_354002.1 two component response regulator BAC0638 Protein 1e-36 44
ragA NP_354002.1 two component response regulator BAC0308 Protein 1e-41 43
ragA NP_354002.1 two component response regulator BAC0197 Protein 5e-43 43
ragA NP_354002.1 two component response regulator BAC0533 Protein 3e-19 41
ragA NP_354002.1 two component response regulator CP000647.1.gene4257. Protein 3e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ragA NP_354002.1 two component response regulator VFG1390 Protein 6e-38 43
ragA NP_354002.1 two component response regulator VFG0596 Protein 1e-38 41
ragA NP_354002.1 two component response regulator VFG1389 Protein 6e-32 41