Gene Information

Name : Atu0629 (Atu0629)
Accession : NP_353651.1
Strain :
Genome accession: NC_003062
Putative virulence/resistance : Virulence
Product : two component response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 618020 - 618697 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAATACTTCTTGTAGAAGACGATAATACAACCGGGAACTATGTTACAAAGGGACTTGCCTCCGCCGGCCACATAGT
TGACTGGGTAAAGGACGGGCGTGAGGCGCTGGCTGCCGGCCTCGACGGAGGATACGACGTCGCCATCGTGGACCGCATGA
TCCCCGGACTCGACGGCCTTAATCTGGTCAAGAGCCTGCGCGCGGCCTCGATACGCATACCCATCCTTTTTCTGACAGCG
ATGAGCGGTGTGGATGACCGTGTCGAAGGGCTGGAAGCCGGCGGTGACGACTATCTGGTAAAGCCCTTCGCTTTTTCTGA
ACTGACGGCGAGAATCAATGCTCTCGTCCGTCGACCGCCCATCACCACGGAGAAGACGCGCCTGCGTGTCGGCGACCTCG
AAATGAACCTTGTCACCAGAACAACATCGCGCGGAGGACAGCGGATTGATCTGCTGCCACGCGAGTTCTCGCTTCTGGAA
CTGCTCATGCGTAACGAAGGTCGAATCCTGACGAAAACGATGTTTCTCGAGAAAATCTGGAACTTCAATTTCGATCCGCA
GAGCTCCGTCGTGGAAACGCACATCAGCCGGCTGAGGGCGAAAATCGACAAACCGTTTGATCAGCCACTTCTGCATACCG
TCAAAAACACGGGCTATACGCTTCATGCCCGGCGCTAG

Protein sequence : 
MKILLVEDDNTTGNYVTKGLASAGHIVDWVKDGREALAAGLDGGYDVAIVDRMIPGLDGLNLVKSLRAASIRIPILFLTA
MSGVDDRVEGLEAGGDDYLVKPFAFSELTARINALVRRPPITTEKTRLRVGDLEMNLVTRTTSRGGQRIDLLPREFSLLE
LLMRNEGRILTKTMFLEKIWNFNFDPQSSVVETHISRLRAKIDKPFDQPLLHTVKNTGYTLHARR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-39 45
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 8e-39 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Atu0629 NP_353651.1 two component response regulator BAC0083 Protein 2e-50 50
Atu0629 NP_353651.1 two component response regulator BAC0125 Protein 8e-46 48
Atu0629 NP_353651.1 two component response regulator BAC0197 Protein 5e-45 47
Atu0629 NP_353651.1 two component response regulator BAC0638 Protein 6e-46 46
Atu0629 NP_353651.1 two component response regulator BAC0347 Protein 5e-42 43
Atu0629 NP_353651.1 two component response regulator BAC0111 Protein 4e-47 43
Atu0629 NP_353651.1 two component response regulator BAC0308 Protein 2e-42 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Atu0629 NP_353651.1 two component response regulator VFG0596 Protein 9e-40 45
Atu0629 NP_353651.1 two component response regulator VFG1390 Protein 2e-34 41