|
Name : rph (SMc01144) Accession : NP_384482.1 Strain : Sinorhizobium meliloti 1021 Genome accession: NC_003047 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : 2.7.7.56 Position : 406593 - 407312 bp Length : 720 bp Strand : - Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGCGGCCATCCGGTAGAAAAACCGACCAAATGCGCAAGGTCTCGTTCGAGCGCAGTTTCTCCAAGCATGCGGAAGGATC CTGCCTGGTACGCTTCGGCGACACGCATGTTCTGTGCACCGCGAGCCTGGAGGAAAAAGTTCCGGCTTGGCTGCGCAACG GCGGCAAAGGCTGGATCACCGCGGAATATGGCATGCTGCCGCGGGCGACCGGCGAGCGCATGAGGCGCGAGGCGGCGACC GGCAAGCAGAGCGGCCGCACGCAGGAGATCCAGAGGCTGATCGGGCGGTCGCTCAGAGCCGTCGTCGATCTTCCGGCGCT CGGCGAACGTCAGATCTCGATCGACTGCGACGTGATTCAGGCCGACGGCGGCACGCGCACCGCGTCGATCACCGGCGCCT GGATCGCCCTCCACGACTGTTTGAAGTGGATGGAGGCGCGCAACATGGTCAAGCTGGAGAAGGTCTTGAAAGATCATGTG GCCGCCATTTCCTGCGGCATCTTCGCCAATCAGCCGGTTATCGACCTCGATTATCTGGAAGACTCGGCTGCGGAGACGGA TGCCAATTTCGTGATGACGGGCAGCGGCGGCCTGGTCGAGATCCAGGGAACGGCGGAAGGCAAGCCCTTCAGCGAAGAAG AATTCGCAAGCCTGATGCTGCTCGCCAAGAACGGCATTGCCGAACTCGTCGAAATGCAGAAGCAGGCGATAGCAGGCTAG Protein sequence : MRPSGRKTDQMRKVSFERSFSKHAEGSCLVRFGDTHVLCTASLEEKVPAWLRNGGKGWITAEYGMLPRATGERMRREAAT GKQSGRTQEIQRLIGRSLRAVVDLPALGERQISIDCDVIQADGGTRTASITGAWIALHDCLKWMEARNMVKLEKVLKDHV AAISCGIFANQPVIDLDYLEDSAAETDANFVMTGSGGLVEIQGTAEGKPFSEEEFASLMLLAKNGIAELVEMQKQAIAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 1e-54 | 52 |
