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Name : TRm1b (SMc03948) Accession : NP_387386.1 Strain : Sinorhizobium meliloti 1021 Genome accession: NC_003047 Putative virulence/resistance : Unknown Product : transposase ISRM1 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 3566939 - 3567769 bp Length : 831 bp Strand : - Note : Gene name confidence : predicted by Codon_usage; predicted by Homology; predicted by FrameD DNA sequence : ATGAAGAGCGTTTGCGAAACTTTGGGTGTCGCCCGCTCGAATATCGCCGCGCGTGCCGCAGGCTCCCCTTCCAGAGCCAG AGGACGCCCGCCACTACCTGATCGCGAGCTGGTGGAGGACATCAAGGCCGTCATCGCCGATATGCCCACCTACGGCTATC GGCGTGTCCATGCCATCCTGCGTCGGAATGCCCGGAAACTGGGGCGTTCGTGGCCCAATGCCAAGCGCGTCTACCGGGTG ATGAAGCTGCACAATCTGCTATTGGTGCGCCACACCGGAGCGGTCGATAATCGTCTCCACGAGGGTCAGGTCGCTGTCGA ACGTTCGAACATCAGATGGTGCTCCGACGGCTTCGAGATCGGCTGCGACAACAAGGAGAAGGTCCGGGTCGCCTTCGCCC TCGACTGCTGCGACCGTGAAGCAATCGCCCATGTCGCCACCACCGAGGGCATCAAGAGCCAGGACGTGCAGGACCTCGTG ATCACAGCAGTGGAGAACCGCTTCGGCCGCATCAACATGCTGTCCGAACCCATCGAATGGCTCACCGACAACGGCTCCTG CTTCATCGCCAAGGACACCGCGTCCTTGCTCCGCGACATCGGCATGGAACCGTGCACGACGCCGGTGCGCAGCCCGCAAT CGAACGGCATGGCCGAGGCCTTCGTCAAAACCTTCAAGCGCGATTACGTCGCGGTGAACCCCACCCCGGATGCCGAAACC GTCATGGCGCAACTGCCGTTCTGGTTCGAGCATTACAATAATCTTCACCCGCACAGCGCCTTAGGATATCAATCGCCGCG CGAGTTCATCAGCTCGCAATCTCAAACCTGA Protein sequence : MKSVCETLGVARSNIAARAAGSPSRARGRPPLPDRELVEDIKAVIADMPTYGYRRVHAILRRNARKLGRSWPNAKRVYRV MKLHNLLLVRHTGAVDNRLHEGQVAVERSNIRWCSDGFEIGCDNKEKVRVAFALDCCDREAIAHVATTEGIKSQDVQDLV ITAVENRFGRINMLSEPIEWLTDNGSCFIAKDTASLLRDIGMEPCTTPVRSPQSNGMAEAFVKTFKRDYVAVNPTPDAET VMAQLPFWFEHYNNLHPHSALGYQSPREFISSQSQT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL67379.1 | transposase-like protein | Not tested | PAI II CFT073 | Protein | 6e-58 | 57 |
| insD | YP_002414033.1 | insertion element IS2 transposase InsD | Not tested | Not named | Protein | 8e-58 | 57 |
| unnamed | CAC39284.1 | hypothetical protein | Not tested | LPA | Protein | 1e-58 | 55 |
| SF2985 | NP_708759.1 | insertion element IS2 transposase InsD | Not tested | SHI-1 | Protein | 1e-57 | 55 |
| tnpF | AAD44739.1 | TnpF | Not tested | SHI-2 | Protein | 9e-58 | 55 |
| unnamed | CAC39283.1 | hypothetical protein | Not tested | LPA | Protein | 1e-59 | 55 |
| SF3721 | NP_709460.1 | IS2 transposase TnpB | Not tested | SHI-2 | Protein | 9e-58 | 55 |
| S4061 | NP_839230.2 | insertion element IS2 transposase InsD | Not tested | SHI-2 | Protein | 6e-58 | 55 |
| S3189 | NP_838472.2 | insertion element IS2 transposase InsD | Not tested | SHI-1 | Protein | 3e-57 | 55 |
| S4050 | NP_839218.2 | insertion element IS2 transposase InsD | Not tested | SHI-2 | Protein | 9e-58 | 55 |
| SF3708 | NP_709447.1 | IS2 transposase TnpB | Not tested | SHI-2 | Protein | 9e-58 | 55 |
| ECO111_3773 | YP_003236109.1 | putative IS2 transposase InsAB | Not tested | LEE | Protein | 1e-56 | 54 |
| aec49 | AAW51732.1 | Aec49 | Not tested | AGI-3 | Protein | 1e-56 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| TRm1b | NP_387386.1 | transposase ISRM1 | VFG1732 | Protein | 3e-58 | 57 |
| TRm1b | NP_387386.1 | transposase ISRM1 | VFG0649 | Protein | 5e-58 | 55 |
| TRm1b | NP_387386.1 | transposase ISRM1 | VFG0621 | Protein | 4e-58 | 55 |
| TRm1b | NP_387386.1 | transposase ISRM1 | VFG0608 | Protein | 4e-58 | 55 |
