Gene Information

Name : TRm27.2 (SMc03281)
Accession : NP_387233.1
Strain : Sinorhizobium meliloti 1021
Genome accession: NC_003047
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 3395206 - 3395949 bp
Length : 744 bp
Strand : -
Note : Product confidence : Gene name confidence : predicted by Codon_usage; predicted by Homology

DNA sequence :
ATGAAGAACGTCCACAACACCATAGACGAAGCCCGCCTCGGCATCATGCTCAATGAACTGAGGCTGCCGACAATCAAAAC
GCTGTGGCCGCAATTTGCCGAACAGGCCGATCGTGAAGGGTGGCCCGCGGCTCGCTTCCTCTCCGCTATCGCCGAACACG
AGCTGGCTGAACGGGCGCATCGCAGGATCGAACGTCACCTCGCCGAGGCGCATCTGCCGCCCGGAAAGACGCTCGAGAGC
TTCGCTTTCGACGCTGTGCCCATGGTCTCCAAGGCGCAGGTCATGGCCATTGCCGCCGGCGATAGCTGGCTCGCCAAAGG
TGCCAGTATCCTGTTGTTCGGCCCGCCCGGAGGCGGAAAGAGCCATCTCGCCGCAGCCATTGGCCTCGCACTGATCGAGA
ACGGTTGGCGGGTGCTGTTCACGCGCACGACAGACCTCGTCCAGAAGCTGCAGGTCGCACGGCGTGAGCTCCAGCTCGAA
TCCGCCATCGCAAAGCTCGACAAGTTCGATCTGCTCATCCTCGACGATCTGGCCTACGTCACCAAGGACCAGGCCGAAAC
CAGCGTGCTCTTCGAACTCATCTCCGCAAGATATGAGCGGCGTTCCATCATGATCACCGCCAATCAGCCCTTCGGGGAAT
GGAACCGCGTCTTTCCGGACCCGGCCATGACGCTTGCGGCGGTGGACCGACTTGTTCATCACGCAACCGCGTCACCCAGG
CGCCAAGCGTGCCGCGATCGATGA

Protein sequence :
MKNVHNTIDEARLGIMLNELRLPTIKTLWPQFAEQADREGWPAARFLSAIAEHELAERAHRRIERHLAEAHLPPGKTLES
FAFDAVPMVSKAQVMAIAAGDSWLAKGASILLFGPPGGGKSHLAAAIGLALIENGWRVLFTRTTDLVQKLQVARRELQLE
SAIAKLDKFDLLILDDLAYVTKDQAETSVLFELISARYERRSIMITANQPFGEWNRVFPDPAMTLAAVDRLVHHATASPR
RQACRDR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3608 NP_755483.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-36 42
c5145 NP_756993.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-36 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
TRm27.2 NP_387233.1 transposase VFG1729 Protein 1e-36 42