Gene Information

Name : hemC (SMc03231)
Accession : NP_387185.1
Strain : Sinorhizobium meliloti 1021
Genome accession: NC_003047
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 3339526 - 3340455 bp
Length : 930 bp
Strand : +
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence :
ATGCAAACGAAACCTTTCCGCATCGGCACGCGCGGCAGCCCGCTGGCGATGGCCCAGACGCATGAAACGCGCGATCGGCT
CGCCGCCGCACATGGTCTGCCGCCGGAAATGTTCGAGATCGTCATCCTTTCTACGAAGGGCGACCGGATCACCGACCGGT
CGCTTGCGGAGATCGGCGGCAAGGGCCTGTTCACCGAAGAGCTTGAGCAGCAGCTTCTGTCGGGAGACCTCGACTTCGCC
GTGCATTCGTCCAAGGACATGCCGACGAAGCTGCCTGAGGGGCTGTTCCTTTCCGCTTTCCTGCCGCGCGAGGACATCCG
CGACGCCTTTGTCGGCCGCTCGGCCAAAAGGCTCGTCGATCTCCCGCAAGGCGCCACCGTCGGCTCGTCTTCGCTGCGCC
GTCAGGCGCTGATCCGGCGGCTTCGGCCCGATATCGACGTGATCACCTATCGCGGACAGGTCGAGACACGCCTGCGCAAG
CTTGCCGAAGGTCAGGTCGACGGCACGCTTCTGGCCTATGCCGGCCTAAGGCGGCTCGGCATGGAGCATGTGCCGACGGA
GCTGCTTGATCCGGAAGAATTTCCGCCGGCGCCGGCCCAGGGCGCGATCTGCGTCGAGGCCCGCATCGGCGACGACCGTA
TCAACACGCTGCTTGCGGCAATTGACGATCCGCGCACACACGAGGCGGTTTCCTGCGAGCGCGGCTTCCTGGCGACACTC
GACGGCTCATGCCGCACGCCGATCGCCGGCTACGCGCAATCGGACGGGACACATATCCGCTTTGCCGGCATGATCCTGAC
GCCCGACGGCACCACCTCCCACCAGATCGAAATCGACGGCAGAGCGGCAGACGCGGAAAGGCTTGGGCAGGAGGCCGGCG
AGCGTATCCGCGCCAAGGCCGGACCGGGTTTCTTCTCGAGCTGGAGCTGA

Protein sequence :
MQTKPFRIGTRGSPLAMAQTHETRDRLAAAHGLPPEMFEIVILSTKGDRITDRSLAEIGGKGLFTEELEQQLLSGDLDFA
VHSSKDMPTKLPEGLFLSAFLPREDIRDAFVGRSAKRLVDLPQGATVGSSSLRRQALIRRLRPDIDVITYRGQVETRLRK
LAEGQVDGTLLAYAGLRRLGMEHVPTELLDPEEFPPAPAQGAICVEARIGDDRINTLLAAIDDPRTHEAVSCERGFLATL
DGSCRTPIAGYAQSDGTHIRFAGMILTPDGTTSHQIEIDGRAADAERLGQEAGERIRAKAGPGFFSSWS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 3e-48 43
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 3e-48 43