Gene Information

Name : nagA (SMc02878)
Accession : NP_384309.1
Strain : Sinorhizobium meliloti 1021
Genome accession: NC_003047
Putative virulence/resistance : Virulence
Product : N-acetylglucosamine-6-phosphate deacetylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1820
EC number : 3.5.1.25
Position : 234089 - 235249 bp
Length : 1161 bp
Strand : +
Note : Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD

DNA sequence : 
ATGACTGCGAAGAAGACGATCAGCGGAGCGCGGATTTTCGACGGCATCGACTGGCACGACGGGGCAGCCCTCGTGATCGA
GGCAGGACACGTCAAGGCGATTGCGCCGGCGGGAAGCGTCCCCGCCGGTGGCGAGACCATCGACGCGCGTGGCCTGCTTC
TCGTGCCCGGCTTCATCGATCTGCAGGTGAACGGCGGCGGCGGCGCGCTTCTGAACGAAAAGCCGTCCCTCGAAAGTATC
CGGCAGATCTGCGCGGCGCATGCGCAATTCGGCACGACGGCGCTGCTGCCGACGCTGATCACCGACACGCGCGCGGTCAG
GACCGCGGCCATCGCCGCAGGCATCGAGGCGAAAGCCGCGGCGGTTCCCGGCTTCCTAGGCCTGCATCTCGAAGGCCCGC
ATCTTTCCGTCGCGCGCAAGGGGGCTCACGATCCGGCGCTGATCCGTCCGATGGGCGATGACGATCTTGCCGAGATACTC
GCCTGCGCAAAGGCGCTCAGCCGTCTGATGCTCACCGTGGCCCCGGAAAACGCCACCAAGGAGCAGGTGCGGGCGCTGGC
CGATGCCGGCGTCGTGGTGAGCCTCGGCCATACCGACGTGGATTACGACACCGCCTGCGCCTATGCCAAAGCGGGTGCCC
GGACCGTCACGCATCTCTTCAACGCCATGAGCGGACTCGGCCATCGCGAGCCTGGCGTGGTCGGCGCGGCGCTTTCGACC
GGCACGCTCCACGCCGGCATGATCGCCGACGGTTTTCACGTTCACCCGGCCTCGATGGGCATCGCGCTGCGCGGCAAGAA
AGGCCCGGGACAGATCTTTCTGGTCACCGACGCCATGTCGCCGATCGGCACCGATCAGACGAGCTTCTTCCTGAACGGAC
GGGAAATCCTGCGCCAGGGCGGGCGCCTGACGCTTGCCGACGGCACGCTTGCCGGCGCCGATGTCGACATGCTTTCGTCT
GTCCGCTTCGTCCACCAAAAGCTTGGCCTGCCGATCGAGGAGGCGGTCCGCATGGCCTCCGCCTATCCCGCCGACGCCAT
GGGGATCGCCTCGCACAAGGGCCGGCTCCTGCCGGGTACGGATGCGGATTTCGTGCTGCTCACGCCGGAACTCGCAATGA
AATCGACCTGGATCGGCGGGGAGACGGTTTTTGCGGCTTGA

Protein sequence : 
MTAKKTISGARIFDGIDWHDGAALVIEAGHVKAIAPAGSVPAGGETIDARGLLLVPGFIDLQVNGGGGALLNEKPSLESI
RQICAAHAQFGTTALLPTLITDTRAVRTAAIAAGIEAKAAAVPGFLGLHLEGPHLSVARKGAHDPALIRPMGDDDLAEIL
ACAKALSRLMLTVAPENATKEQVRALADAGVVVSLGHTDVDYDTACAYAKAGARTVTHLFNAMSGLGHREPGVVGAALST
GTLHAGMIADGFHVHPASMGIALRGKKGPGQIFLVTDAMSPIGTDQTSFFLNGREILRQGGRLTLADGTLAGADVDMLSS
VRFVHQKLGLPIEEAVRMASAYPADAMGIASHKGRLLPGTDADFVLLTPELAMKSTWIGGETVFAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1783 NP_231418.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 1e-44 41
nagA-2 YP_001217323.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 1e-44 41
nagA ACA01848.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 6e-45 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
nagA NP_384309.1 N-acetylglucosamine-6-phosphate deacetylase VFG1116 Protein 5e-45 41