Name : recG (SMc00228) Accession : NP_385759.1 Strain : Sinorhizobium meliloti 1021 Genome accession: NC_003047 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : 3.6.1.- Position : 1791477 - 1793582 bp Length : 2106 bp Strand : + Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : ATGCGCCCTGCCCTGCTCGATCCGCTGTTTTCGCCCCTCGACACATTGCCCGGCATCGGCCCGAAGACCGGCGAACTTTA CGCGCGCCTGCTCGGGCGCGAGACGGTTGAAGACTGCCGCGTCGTCGATCTCCTGTTCCATATCCCTCATTCGCTGATCG ATCGTCGCCGCCAGCCCGGCATTGCCCATGCTCCAAACGGTGCGATCGTTACCATCACGGGCCGGGTAGACCGGCACCAG CCGGCACCCAGTGGCAGATCGAACGTGCCCTATCGCGTCTTTCTCCACGACGAGACCGGCGAACTGGCGCTCACCTTCTT CCGCGTCAGGGGGAACTGGCTCGAGAAGGCCCTGCCCATCGATGAGACGGTGATCGTCAGCGGCAAGGTGGACTGGTTCA ACCGGCGGGCTTCCATGGTCCACCCCGACTACATGGTCCGTGCGGCCGAATCGGAGAACATGCCGCTCGTCGAGCCTGTC TACGGGCTGACGGCAGGCCTGACCTCGAGGCCCCTTCGCAAGTCGATCGAGGCGGCAGTGGCGCGCGTCCCGGACCTGCC GGAGTGGCTGGATGAGGCACTTCTGCGCCAACAGGGCTTCAAGAGCGCCAAAGAAAGCTTCCAGCGCCTGCACGAACCGC GGGACGAAACCGATATAGATGCGCAGGCGCCGGCGCGCCGCCGGATCGCCTATGACGAGTTCCTGGCGGGGCAGCTTTCG CTCTCCCTCGTTCGCCAGCGATTGCGCAAGGTCGCCGGTACGCCGATTCATCCGACCGGCCGGTTGAGCGGTCCGGTAAT CGCAGCCCTGCCCTTCTCCTTGACGAACAGCCAGTCGGCGGCCGTCGACGAGATCCTTGCCGACATGTCCGGCGCCGACC GCATGCTGCGGCTGCTGCAGGGGGACGTCGGCTCCGGCAAGACGGCCGTGGCCTTGATGGCGATGCTGGCGGCGGTGGAA TCCGGCGGCCAGGCGGTGCTGATGGCGCCGACGGAAATTCTCGCGCGGCAGCACCACGCCACGCTTTCGAGGATGGCCGC GCCGGCGGGCATCACGATCGATATCCTGACCGGCAGGACGAAGGGCAAGGAACGGGACGCGATACTGGAACGCATTGCCT CCGGCGAGACGCAGCTGGTCATCGGCACGCACGCACTCTTCCAGGACGCTGTGATCTATCGCCAACTCGTCCTCGCCGTG GTCGACGAGCAGCATCGTTTCGGCGTGCATCAGAGGCTGCGGCTGACGGCCAAGGGTATCTCGCCGCACATGCTCGTGAT GACCGCGACGCCGATTCCGAGAACACTCGTGCTCGCCGCCTTCGGCGACATGGACGTATCGAAGCTCACGGAGAAGCCGG CGGGCCGCAAACCGATCCAGACCGTCACGATTCCGAACGAACGGACGGACGAGATCGTGGAGAGGCTCGACGCAGCGCTC CGGCAGGGCAAGAAGGCCTATTGGATCTGCCCGCTCGTCGAGGAATCCGAGGAGACCGACGCCATGTCCGCCGATGAGCG CTACCAGAGCCTTGCTCGACGGTTCGGCAAGGATGTCGGCCTGGTGCACGGGCGCATGGCAGGACCGGAAAAAGACGCCG TCATGCTCGCCTTCAAGAACGGTGAAATCCGTTTGCTCGTGGCTACGACGGTCGTCGAGGTCGGCGTTGACGTGCCGGAT GCCACGATCATGGTCATCGAGCACGCCGAACGCTTCGGCCTTGCGCAACTGCACCAGCTACGCGGCCGCGTGGGGCGCGG CGACGAAGCCTCGACCTGCATCCTTTTGTACAAGAGCCCGCTCAGCGAAGCAGGGCGCGCGCGTCTTTCGGTCCTCCGTG AAAGCGAAGACGGGTTCCTGATCGCCGAGGAGGATCTGAAGCTGCGCGGCGAAGGCGAGCTTCTCGGCACGCGGCAGTCC GGCACGCCGGGTTTCCTCATCGCAAGCCTCGAGGCGCATGCCGACCTCCTGGAGATGGCGCGCAAGGACGCCGCCTATGT CATAGACAGGGATCCGGAACTGACGTCGGAACGCGGCCAGGCGCTCAGGACGCTGCTCTACCTCTTCCGGCGCGACGAGG CGATCCGGTTCCTGCGGGCCGGCTGA Protein sequence : MRPALLDPLFSPLDTLPGIGPKTGELYARLLGRETVEDCRVVDLLFHIPHSLIDRRRQPGIAHAPNGAIVTITGRVDRHQ PAPSGRSNVPYRVFLHDETGELALTFFRVRGNWLEKALPIDETVIVSGKVDWFNRRASMVHPDYMVRAAESENMPLVEPV YGLTAGLTSRPLRKSIEAAVARVPDLPEWLDEALLRQQGFKSAKESFQRLHEPRDETDIDAQAPARRRIAYDEFLAGQLS LSLVRQRLRKVAGTPIHPTGRLSGPVIAALPFSLTNSQSAAVDEILADMSGADRMLRLLQGDVGSGKTAVALMAMLAAVE SGGQAVLMAPTEILARQHHATLSRMAAPAGITIDILTGRTKGKERDAILERIASGETQLVIGTHALFQDAVIYRQLVLAV VDEQHRFGVHQRLRLTAKGISPHMLVMTATPIPRTLVLAAFGDMDVSKLTEKPAGRKPIQTVTIPNERTDEIVERLDAAL RQGKKAYWICPLVEESEETDAMSADERYQSLARRFGKDVGLVHGRMAGPEKDAVMLAFKNGEIRLLVATTVVEVGVDVPD ATIMVIEHAERFGLAQLHQLRGRVGRGDEASTCILLYKSPLSEAGRARLSVLRESEDGFLIAEEDLKLRGEGELLGTRQS GTPGFLIASLEAHADLLEMARKDAAYVIDRDPELTSERGQALRTLLYLFRRDEAIRFLRAG |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 1e-177 | 63 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
recG | NP_385759.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 1e-106 | 44 |