Gene Information

Name : glnA (SMc00948)
Accession : NP_385746.1
Strain : Sinorhizobium meliloti 1021
Genome accession: NC_003047
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 1774760 - 1776169 bp
Length : 1410 bp
Strand : +
Note : predicted by Codon_usage; predicted by Homology; predicted by FrameD

DNA sequence :
ATGACGACTGCGAATGAAGTTCTGAAGCAGATCAAGGAAAACGACGTCAAGTTCGTAGACCTGCGCTTTACCGACCCCAA
GGGCAAGCTGCAGCACGTGACGATGGATGTCGTCTGCGTCGACGAAGACATGTTCGCCGACGGCGTCATGTTCGACGGTT
CCTCGATCGGCGGCTGGAAGGCTATCAACGAATCCGACATGGTGCTGATGCCCGATCCGGAAACGGCGCATATGGACCCG
TTCTTCGCCCAGTCCACGATGGTCATCTTCTGCGACATTCTCGATCCGGTTTCGGGCGAAGCCTATAACCGCGACCCGCG
CGGCACGGCCAAGAAGGCAGAAGCCTACCTCAAGGCCTCCGGCATCGGCGACACGGTCTTCGTAGGTCCGGAAGCGGAAT
TCTTCGTCTTCGACGACGTCAAGTACAAGGCCGATCCGTACAACACCGGTTTCAAGCTCGACAGCTCCGAACTGCCCTCC
AACGACGACACGGACTACGAGACCGGCAACCTCGGTCACCGCCCCCGTGTCAAGGGCGGCTATTTCCCGGTTCCGCCGGT
TGACAGCAGCCAGGACATGCGCTCCGAAATGCTGACCGTGCTGTCCGAAATGGGCGTGACGGTTGAAAAGCATCACCACG
AAGTGGCAGCGGCGCAGCACGAGCTGGGCGTCAAGTTCGATGCCCTCGTGCGCAATGCCGACAAGATGCAGATCTACAAG
TATGTCGTGCACCAGGTCGCCAATGCCTATGGCAAGACCGCGACCTTCATGCCGAAGCCGATCTTCGGCGACAACGGCTC
GGGCATGCACGTGCATTTGTCGATCTGGAAGGACGGCAAGCCGACCTTTGCCGGCGACGAGTATGCCGGGCTTTCCGAAT
CCTGCCTCTACTTCATCGGTGGCATCATCAAGCATGCCAAGGCGCTGAATGCCTTCACCAACCCGTCGACGAACTCCTAC
AAGCGCCTCGTCCCGGGTTATGAAGCACCGGTCCTGCTCGCCTATTCGGCCCGCAACCGCTCGGCCTCCTGCCGCATCCC
CTTCGGCACCAACCCGAAGGCGAAGCGCGTCGAAGTCCGCTTCCCCGATCCGACGGCGAACCCCTACCTCGCCTTCGCCG
CGATGCTGATGGCCGGTCTCGACGGCATCAAGAACAAGCTCCACCCCGGCAAGGCCATGGACAAGGACCTCTACGACCTG
CCGCCGAAGGAACTGAAGAAGATCCCGACCGTCTGCGGCAGCCTGCGCGAAGCGCTCGAAAGCCTCGACAAGGACCGCAA
GTTCCTGACCGCTGGCGGCGTTTTCGACGACGACCAGATCGACTCCTTCATCGAACTGAAGATGCAGGAAGTCATGCGCT
TCGAAATGACGCCGCACCCGGTCGAGTTCGACATGTACTATTCCGTCTGA

Protein sequence :
MTTANEVLKQIKENDVKFVDLRFTDPKGKLQHVTMDVVCVDEDMFADGVMFDGSSIGGWKAINESDMVLMPDPETAHMDP
FFAQSTMVIFCDILDPVSGEAYNRDPRGTAKKAEAYLKASGIGDTVFVGPEAEFFVFDDVKYKADPYNTGFKLDSSELPS
NDDTDYETGNLGHRPRVKGGYFPVPPVDSSQDMRSEMLTVLSEMGVTVEKHHHEVAAAQHELGVKFDALVRNADKMQIYK
YVVHQVANAYGKTATFMPKPIFGDNGSGMHVHLSIWKDGKPTFAGDEYAGLSESCLYFIGGIIKHAKALNAFTNPSTNSY
KRLVPGYEAPVLLAYSARNRSASCRIPFGTNPKAKRVEVRFPDPTANPYLAFAAMLMAGLDGIKNKLHPGKAMDKDLYDL
PPKELKKIPTVCGSLREALESLDKDRKFLTAGGVFDDDQIDSFIELKMQEVMRFEMTPHPVEFDMYYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 3e-107 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA NP_385746.1 glutamine synthetase VFG1399 Protein 3e-109 50