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Name : deoA (SMc04122) Accession : NP_384236.1 Strain : Sinorhizobium meliloti 1021 Genome accession: NC_003047 Putative virulence/resistance : Unknown Product : thymidine phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.4 Position : 152705 - 154027 bp Length : 1323 bp Strand : + Note : Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate DNA sequence : ATGGCCATGCTTCCGCAGGAAATCATACGAAAGAAAAGGGACGGCGATCGGCTCGATCCGGCGGAGATCGCCGGTTTCAT CGCGGGCGTGACCGATGGCTCGGTCTCGGAAGGGCAGGCGGCTGCCTTCGCCATGGCGGTCTGGTTCTCCGGCATGAATC GCGACGAATGCGTGGCGCTGACGCTGGCGATGCGCGATTCCGGGGAAACGCTCGACTGGAGCGATCTCGCACGCCCCATT GTCGACAAGCACTCGACGGGCGGAGTCGGCGACAATGTCTCGCTCATGTTGGCGCCGATCGTCGCCGCCTGCGGTGCGGC CGTGCCGATGATTTCGGGCCGGGGGCTCGGCCACACCGGCGGGACGCTCGACAAGCTCGAATCGATCCCCGGCTATGACA TCCAGCCTTCGCCGGAACTGTTCCGCCGCGTGGCCGACGAGGTCGGCTGCGCGATCATCGGCCAGACGGCCGATCTGGCG CCGGCCGACAAGCGCCTCTATGCGATCCGCGACGTGACGGCGACGGTCGATTCGGTGCCGCTGATCACCGCATCGATCCT GTCGAAAAAGCTCGCCGCAGGGCTACGGTCGCTGGTGCTCGACGTCAAGCTCGGCAACGGCTCCTTCATGACCGATCCTG CCGAAACCGAAGTCCTGGCGCGTTCGCTTGTCGAGGTCGCCAATGGTGCGGGCGTGCGCACCTCTGCGCTGATCACCGAC ATGAACGAGCCGCTGGCGGACGCGGCCGGCAACGCGCTCGAAATCGAGAACTGCCTGGCCTATCTGCGCGGCGAGAAAGC GGGAACCCGCCTCGATCAGGTCGTGATGGCCTTGGCTGCGGAGATGCTCGTTGCAGCGGGTATTGCGGCTCACGAAGCCG AAGCCGAAGCCATGGCGCGGCGCGTTTTGGGGAGCGGGGAGGCGATGGAGCGCTTCGGCCTCATGGTGCATCGGCTCGGC GGCCCTGCCGATTTTGTCGATCGCCCGGGCGCCTATCTTGCCAAGGCACCCGCGATCCTTGCCGTGCCGGCGGGCCGGCA TGGTTATCTCACGTCCTGCAAGACGCGCGAACTGGGAATGGCAGTCATCGAGCTCGGCGGCGGGCGCATCCGCCCGGATG ACCGGATCGATCACCGCGTCGGTCTTACCGGCCTGAGGCCGCTCGGGACGAAAGTCGAAAAGGGCGAGCCGATCGCCTTC GTCCATGCTGCCGACCAAAGCCAGGCCGAGGCGATCGCAAAACGGGTCGTAACGCTCTATGCGATCGCAGACGAGGAGCC GGCGCGACGGCCGGTGATCGTTTCGAAGCTCAGAGCGGGATGA Protein sequence : MAMLPQEIIRKKRDGDRLDPAEIAGFIAGVTDGSVSEGQAAAFAMAVWFSGMNRDECVALTLAMRDSGETLDWSDLARPI VDKHSTGGVGDNVSLMLAPIVAACGAAVPMISGRGLGHTGGTLDKLESIPGYDIQPSPELFRRVADEVGCAIIGQTADLA PADKRLYAIRDVTATVDSVPLITASILSKKLAAGLRSLVLDVKLGNGSFMTDPAETEVLARSLVEVANGAGVRTSALITD MNEPLADAAGNALEIENCLAYLRGEKAGTRLDQVVMALAAEMLVAAGIAAHEAEAEAMARRVLGSGEAMERFGLMVHRLG GPADFVDRPGAYLAKAPAILAVPAGRHGYLTSCKTRELGMAVIELGGGRIRPDDRIDHRVGLTGLRPLGTKVEKGEPIAF VHAADQSQAEAIAKRVVTLYAIADEEPARRPVIVSKLRAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 4e-64 | 42 |
