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Name : gabD1 (SMc02780) Accession : NP_384120.1 Strain : Sinorhizobium meliloti 1021 Genome accession: NC_003047 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase [NADP+] protein Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 11996 - 13450 bp Length : 1455 bp Strand : + Note : Product confidence : probable; Gene name confidence : probable; predicted by Codon_usage; predicted by Homology; predicted by FrameD DNA sequence : ATGAATCTGAAAGACCCGTCGCTGTTTCGCCAGGCTGCTCTCGTGGGCGAGACCTGGATCGAAGCCGACCCGAAGAATGC GATCGAGGTGAACAATCCAGCGACCGGCGAAATCATCGGCCGCGTCCCGAAGCTCGGCGCCGCCGATACCCGGACCGCGA TCGAGGCCGCGGCGCGGGTGCAGAAGGAATGGGCGGCGAGGACCGCCAAGGAGCGCTCGGCGGTGCTGCGCCGCTGGTTC GAGCTGATGATCGAAAACAAGGACGATCTCGGCCGGATTCTGACGATGGAGCAGGGCAAGCCGCTAGCGGAGGCGACAGG CGAGATCGTCTACGGAGCGAGCTTCATCGAATGGTTCGCGGAAGAGGCGCGGCGTGTCTATGGCGATCTCGTCCCCGGGC ATCAGAAGGACAAGCGCATTCTGGTGATGAAGCAGCCGATCGGCGTCGTCGCCGCGATCACGCCGTGGAACTTCCCGAAC GCGATGATCACCCGCAAGGCCGGGCCGGCCCTTGCCGCCGGCTGCGCCATGGTCTTGAAGCCGGCAGCGCAGACGCCGTT TTCGGCGATCGCCATCGCCGTGCTCGCCGAGCGCGCGGGCATGCCGAAAGGTCTCTTCAGCGTCATTACCGGCTCCGCGC GCGAGATCGGCGCCGAGATGACTTCGAACCCGACCGTCCGCAAGCTTACCTTTACCGGCTCGACCGAGGTCGGCGCAGAG CTCTACCGCCAGAGCGCGGCAACGATCAAGAAGCTTGGCCTGGAACTCGGCGGCAACGCCCCGTTCATCGTCTTCGATGA TGCCGATCTCGATGCGGCGGTCGAAGGCGCGCTGATCGCCAAGTTCCGCAACAATGGCCAGACCTGCGTCTGCGCCAACC GCATCTATGTGCAGGACGGCGTCTACGAGGCCTTCTCCGACAAGCTCGCCCAGGCCGTCGCCAAGCTCAAGACCGGCAAC GGCATGGAGGACGGCGTCATCCTCGGACCGCTGATCGACCAGCCGGCGCTGAAAAAGGTCGAGGAGCATGTGGCGGATGC GCTTGCGAAGGGCGCGCGCGTGGTGCAGGGCGGCCGTCGCCATTCACTCGGCGGCACCTTCTACGAGGCGACGGTGCTGG CCGACGTGACCCAGGCGATGGCGGTCGCGCGGGAAGAGACCTTCGGACCGGTAGCGCCGCTCTTCCGCTTCAAGGACGAG TCGGATGTGATCGCACAGGCGAACGACACCGAATTCGGCCTCGCCTCCTATTTCTACGCCAAGGACCTCGCCCGCGTCTT CCGCGTGGCGGAAGCGCTGGAATACGGCATGGTCGGTGTCAATACAGGCCTGATCTCCACGGCCGAAGCACCCTTTGGTG GCGTCAAGCTCTCGGGCCTTGGCCGCGAGGGCTCGAAATACGGCATCGAGGAATTCATGGAGATCAAATATGTCTGCCTC GGCGGCATTGCCTGA Protein sequence : MNLKDPSLFRQAALVGETWIEADPKNAIEVNNPATGEIIGRVPKLGAADTRTAIEAAARVQKEWAARTAKERSAVLRRWF ELMIENKDDLGRILTMEQGKPLAEATGEIVYGASFIEWFAEEARRVYGDLVPGHQKDKRILVMKQPIGVVAAITPWNFPN AMITRKAGPALAAGCAMVLKPAAQTPFSAIAIAVLAERAGMPKGLFSVITGSAREIGAEMTSNPTVRKLTFTGSTEVGAE LYRQSAATIKKLGLELGGNAPFIVFDDADLDAAVEGALIAKFRNNGQTCVCANRIYVQDGVYEAFSDKLAQAVAKLKTGN GMEDGVILGPLIDQPALKKVEEHVADALAKGARVVQGGRRHSLGGTFYEATVLADVTQAMAVAREETFGPVAPLFRFKDE SDVIAQANDTEFGLASYFYAKDLARVFRVAEALEYGMVGVNTGLISTAEAPFGGVKLSGLGREGSKYGIEEFMEIKYVCL GGIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 6e-151 | 61 |
