Gene Information

Name : SMc02644 (SMc02644)
Accession : NP_385186.1
Strain : Sinorhizobium meliloti 1021
Genome accession: NC_003047
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 1176683 - 1178989 bp
Length : 2307 bp
Strand : +
Note : Product confidence : hypothetical; Gene name confidence : hypothetical; predicted by Codon_usage; predicted by Homology; predicted by FrameD

DNA sequence :
ATGGTCACGACCGCAAAGCCCATCGCCGCCATCATCGCCAGCGAAATCAAGGCGACCGCCGCCCAGGTCGCGGCGGCCGT
CGAATTGCTGGATGGCGGGGCAACCGTGCCTTTCATCGCCCGCTACCGAAAGGAGGTCACCGGCGGCCTCGACGATACGC
AACTGCGCGTCCTGTCGGAGCGGCTCACCTATCTGCGTGAGCTTGAAGCGCGGCGGGCGTCGATCGTCGATTCGATCCGC
AGCCAGGGCAAGATGACCGACGAGCTCGAAGGCAAGATCGCCGGCGCGGTTACCAAGGCCGAACTCGAAGACATCTACCT
GCCCTACAAGCCGAAGCGCCGCACCAAGGCGGAAATCGCGCGCGAACGTGGTCTGGGTGCACTGGCCGAAGCAATCCTTT
CCGATCGATCGGTCGCGCCGGCCGAACGCGCGGCCGCTTTCCTCACCGCCGATGTGCCGGACGTCAAGACCGCACTCGAC
GGCGCCCGCGATATCATTGCCGAAGCCATGAGCGAGAACGCCGACCTTCTCGGGCGGTTGCGGAACCACATGCGGGAGGT
AGCCTTCCTGCGCGCCCGGGTCGTGGACGGCAAGCAGGAGTCCGGCGCCAAATTCTCGGACTATTTCGACCATTCCGAGC
GCTGGGCGACGGTGGCCGGGCACCGCGCATTGGCGATGCTGCGCGGCTGGAACGAAGAGGTCCTCTCGGTCGATATCGTA
GTCGATCAGGAGGCGTCGCCTTCGCTGAGGCCGACCGAGCGCATGATCGCGGCGGCGTACAATGTCGGCGATCGGTTACC
CGCCGACCGGTGGCTGCTGGAGGTGATCGGCTGGACGTGGCGCGTCAAACTCTCGCTCTCGCTGTCGCTGGACCTGATGC
GCGAGCTGCGCGAGCGGGCCGAAGAAGAGGCCATCCGCGTCTTCGCGCGCAATCTCAAGGACCTGCTGCTCGCGGCACCG
GCGGGCTCGCGCGCGACGATGGGCCTCGACCCCGGCATCCGAACCGGCGTCAAGGTCGCGGTCGTCGACGGCACCGGCAA
GCTGCTCGACACCGCCACGGTCTATCCCTTTCCGCCGAAGAACGACATCCGCGGTACCCAGGCGGAGCTTGCGGCGCTCG
TGCGCAAGCACAAGGTGGAACTGATCGCGATCGGCAACGGTACCGGTAGCCGTGAAACGGAGAAGCTCGTCGCAGACATG
CTCGCTGCCATGCCGGCGCCGAAGCCTACCAAGGTGATCGTGTCCGAGGCGGGCGCATCGGTCTATTCCGCTTCGGAGAC
GGCGGCCGCCGAGTTCCCGGGCCTCGACGTTTCCCTGCGGGGCGCCGTCTCGATCGCCCGCCGGCTGCAGGACCCGCTGG
CCGAGCTCGTCAAGATCGAACCGAAGTCGATCGGCGTCGGCCAGTACCAGCACGACGTCGACCAGTCGAAGCTCAGCCGC
TCGCTCGATGCCGTTGTCGAGGATGCGGTGAACGCCGTTGGGGTCGATCTCAACACCGCCTCGGCGCCGCTCCTGGCGCG
TGTCTCGGGGCTGGGCAAGTCCTCGGCCGAGGCAATCGTCGCGCACCGGGATGCGATGGGGGCCTTCGCCAGCCGCAAGG
AACTTTTGAAAGTGCCGCGTCTCGGCGCGCGCACCTTCGAGCAGTGCGCCGGCTTCCTGCGGATACCGAACGGGTCCGAG
CCGCTCGATGCGTCGGCCGTACATCCGGAGGCCTATGGCGTCGCCAAGAAGATCGTTGCAGCCTGCGGCCGGGACGTGCG
CTCGCTGATGGCAGATAGCGCCGAGCTGAAAAAACTCGACCCGCGCATTTTCGTCGACGAGCGCTTCGGCCTGCCGACGG
TCAAGGACATCCTGGCCGAACTCGAGAAACCGGGCCGCGATCCGCGCCCGAGCTTCAAGACGGCGACCTTTGCGGAAGGC
GTGGACGACATCAAGGATCTGAAAGTCGGGATGCGGCTCGAGGGCACGGTGACCAATGTCGCAGCGTTCGGCGCCTTCGT
CGATATCGGCGTGCACCAGGACGGCCTCGTCCACGTGTCGCAACTGGCCGACCGCTTCGTCAAGGATCCGCATGAGGTCG
TCAAGGCGGGTGACGTCGTGCAGGTCCGCGTCACGGAGGTCGATGTCGCGCGCAAGCGCATCGGGCTTTCCATGCGCAAG
GAAGGCGGCACCGATACGCCCCGCGAGGCGAGGGGGGCGGCACCGAAGGGCGGAAACCGGGGCGGGTCGGCCCGGTCGCA
AACACCGCAGGAGCCGGCGCAAGGCGCGTTCGGCGCGGCGCTGATGGCGGCGATGAAGAAAAAATGA

Protein sequence :
MVTTAKPIAAIIASEIKATAAQVAAAVELLDGGATVPFIARYRKEVTGGLDDTQLRVLSERLTYLRELEARRASIVDSIR
SQGKMTDELEGKIAGAVTKAELEDIYLPYKPKRRTKAEIARERGLGALAEAILSDRSVAPAERAAAFLTADVPDVKTALD
GARDIIAEAMSENADLLGRLRNHMREVAFLRARVVDGKQESGAKFSDYFDHSERWATVAGHRALAMLRGWNEEVLSVDIV
VDQEASPSLRPTERMIAAAYNVGDRLPADRWLLEVIGWTWRVKLSLSLSLDLMRELRERAEEEAIRVFARNLKDLLLAAP
AGSRATMGLDPGIRTGVKVAVVDGTGKLLDTATVYPFPPKNDIRGTQAELAALVRKHKVELIAIGNGTGSRETEKLVADM
LAAMPAPKPTKVIVSEAGASVYSASETAAAEFPGLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVDQSKLSR
SLDAVVEDAVNAVGVDLNTASAPLLARVSGLGKSSAEAIVAHRDAMGAFASRKELLKVPRLGARTFEQCAGFLRIPNGSE
PLDASAVHPEAYGVAKKIVAACGRDVRSLMADSAELKKLDPRIFVDERFGLPTVKDILAELEKPGRDPRPSFKTATFAEG
VDDIKDLKVGMRLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVQVRVTEVDVARKRIGLSMRK
EGGTDTPREARGAAPKGGNRGGSARSQTPQEPAQGAFGAALMAAMKKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 60